RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 CLDN14O95500 239 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 IGKV1-39P01597 117 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 IGKV1D-39P04432 117 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 HKR1P10072 659 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 ZNF585BQ52M93 769 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 AGMATQ9BSE5 352 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 GSX2Q9BZM3 304 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 PSG11Q9UQ72 335 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 POMT1Q9Y6A1 747 aa22.04■■□□□ 1.12
SH3GL3-202ENST00000427482 IGHV1-69-2A0A0G2JMI3 117 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 F5H0A9 414 aaPredicted RBP22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 ST8SIA5O15466 376 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 THOC7Q6I9Y2 204 aaKnown RBP22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 KBTBD11-OT1A0A1B0GTJ5 212 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 E5RGE8 158 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 TNFRSF13BO14836 293 aaPredicted RBP22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 ZG16O60844 167 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 FGFRL1Q8N441 504 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 ITLN2Q8WWU7 325 aaPredicted RBP22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 CORO2AQ92828 525 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 CLN8Q9UBY8 286 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 NSG2Q9Y328 171 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 RELNP78509 3460 aa22.03■■□□□ 1.12
SH3GL3-202ENST00000427482 AGAP20933 346 aa22.02■■□□□ 1.12
SH3GL3-202ENST00000427482 ABHD14BQ96IU4 210 aa22.02■■□□□ 1.12
SH3GL3-202ENST00000427482 PLEKHA2Q9HB19 425 aa22.02■■□□□ 1.12
SH3GL3-202ENST00000427482 SDHAF2Q9NX18 166 aa22.02■■□□□ 1.12
SH3GL3-202ENST00000427482 SLC25A10Q9UBX3 287 aaPredicted RBP22.02■■□□□ 1.12
SH3GL3-202ENST00000427482 A0A0G2JRQ6 117 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 OMGP23515 440 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 RPL12P30050 165 aaKnown RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 NKX2-1P43699 371 aaPredicted RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 RAB14P61106 215 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 RPL30P62888 115 aaKnown RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 CATR1Q13166 79 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 LSM10Q969L4 123 aaKnown RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 RCL1Q9Y2P8 373 aaKnown RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 USF3Q68DE3 2245 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 ZNF729A6NN14 1252 aaPredicted RBP22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 SLC25A6P12236 298 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 PPOXP50336 477 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 DMBX1Q8NFW5 382 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 STOML3Q8TAV4 291 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 GPR146Q96CH1 333 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 LINC00574Q9H8X3 128 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 CYTL1Q9NRR1 136 aa22.01■■□□□ 1.11
SH3GL3-202ENST00000427482 LINC00862A6NCI5 91 aa22■■□□□ 1.11
SH3GL3-202ENST00000427482 NDUFB7P17568 137 aa22■■□□□ 1.11
SH3GL3-202ENST00000427482 ZNF66Q6ZN08 573 aa22■■□□□ 1.11
SH3GL3-202ENST00000427482 PCNPQ8WW12 178 aaKnown RBP22■■□□□ 1.11
SH3GL3-202ENST00000427482 GFOD1Q9NXC2 390 aa22■■□□□ 1.11
SH3GL3-202ENST00000427482 A0A1B0GU03 582 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 ITGB1BP1O14713 200 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 S100A1P23297 94 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 Q3ZCU0 254 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 BTNL3Q6UXE8 466 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 C11orf1Q9H5F2 150 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 hADV38S2A0JD32 116 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 FCN3O75636 299 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 IGKV1-5P01602 117 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 HFEQ30201 348 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 TCTEX1D1Q8N7M0 179 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 RNASE11Q8TAA1 199 aaKnown RBP21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 PHYHIPLQ96FC7 376 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 ZC4H2Q9NQZ6 224 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 FAM212BQ9NTI7 297 aaPredicted RBP21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 LINC00312Q9Y6C7 94 aa21.99■■□□□ 1.11
SH3GL3-202ENST00000427482 PITX3O75364 302 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 CLDN1O95832 211 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 GPR12P47775 334 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 P2RY1P47900 373 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 CXorf66Q5JRM2 361 aaPredicted RBP21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 LYPD2Q6UXB3 125 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 TCTEX1D2Q8WW35 142 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 HSD17B10Q99714 261 aaKnown RBP21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 IDI2-AS1Q9NZ38 188 aa21.98■■□□□ 1.11
SH3GL3-202ENST00000427482 YLPM1P49750 1951 aaKnown RBP21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 EPHA1P21709 976 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 LPAR6P43657 344 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 ID3Q02535 119 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 MEF2CQ06413 473 aaPredicted RBP21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 TMEM30BQ3MIR4 351 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 IFI27L2Q9H2X8 130 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 KAAG1Q9UBP8 84 aa21.97■■□□□ 1.11
SH3GL3-202ENST00000427482 TAAR5O14804 337 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 ZNF134P52741 427 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 AKR1C2P52895 323 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 POLR2GP62487 172 aaKnown RBP eCLIP21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 TAS2R3Q9NYW6 316 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 ACACBO00763 2458 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 ABCA4P78363 2273 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 RAMP3O60896 148 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 TPT1P13693 172 aaKnown RBP21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 BRWD1-AS2P59051 145 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 UTF1Q5T230 341 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 C19orf12Q9NSK7 152 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 CTSZQ9UBR2 303 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 AUP1Q9Y679 476 aa21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 SMG1Q96Q15 3661 aaKnown RBP21.96■■□□□ 1.11
SH3GL3-202ENST00000427482 C17orf98A8MV24 154 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms