RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 RDH5Q92781 318 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SLAMF9Q96A28 289 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 SEH1LQ96EE3 360 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 FAM110AQ9BQ89 295 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM59Q9BXS4 323 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 BEX2Q9BXY8 128 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 RAB1BQ9H0U4 201 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CST11Q9H112 138 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 DNTTIP1Q9H147 329 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 METTL9Q9H1A3 318 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 NCOR1P1Q9H4R4 102 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 AUNIPQ9H7T9 357 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 PLGRKTQ9HBL7 147 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 UFSP2Q9NUQ7 469 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 C1orf123Q9NWV4 160 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 TREM2Q9NZC2 230 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 COMMD3Q9UBI1 195 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 PPP1R3CQ9UQK1 317 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 MAB21L2Q9Y586 359 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
C9orf3-205ENST00000427193 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 OOEPA6NGQ2 149 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 OR2AT4A6NND4 320 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SERPINE3A8MV23 424 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 TRAPPC2LH3BP13 241 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 K7N7A8 449 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SLC33A1O00400 549 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 GSTZ1O43708 216 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 PDCD6O75340 191 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SCGNO76038 276 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 LY6HO94772 140 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 OR2H2O95918 312 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CYB5AP00167 134 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CYB5R3P00387 301 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CGB3P0DN86 165 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CGB7P0DN87 165 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 HIST1H1DP16402 221 aaKnown RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 FUT3P21217 361 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CPT2P23786 658 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CD40LGP29965 261 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 IFITM3Q01628 133 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF45Q02386 682 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 PAX2Q02962 417 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 RSU1Q15404 277 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 FAM189A2Q15884 450 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 TAF9Q16594 264 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SMIM21Q3B7S5 101 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM155Q4W5P6 130 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 CHST4Q8NCG5 386 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 OR56B1Q8NGI3 324 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 OR10R2Q8NGX6 335 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 GPX8Q8TED1 209 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 GIMAP1Q8WWP7 306 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 FAM46BQ96A09 425 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 S100A16Q96FQ6 103 aaKnown RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 COQ2Q96H96 371 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 GPER1Q99527 375 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 REG4Q9BYZ8 158 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SELENOIQ9C0D9 397 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 SRRQ9GZT4 340 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 C6orf62Q9GZU0 229 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 BANF2Q9H503 90 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 LINC00574Q9H8X3 128 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 DYNLRB1Q9NP97 96 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 MYOZ1Q9NP98 299 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 PCDHB16Q9NRJ7 776 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 ELF5Q9UKW6 265 aaPredicted RBP4.41□□□□□ -1.7
C9orf3-205ENST00000427193 ST3GAL6Q9Y274 331 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
C9orf3-205ENST00000427193 YLPM1P49750 1951 aaKnown RBP4.4□□□□□ -1.7
C9orf3-205ENST00000427193 PPIAL4EA0A075B759 164 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 A0A0G2JMP0 313 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 A0A0X1KG70 313 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 A0A1B0GW55 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 MEIOCA2RUB1 952 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 METTL21EPA6NDL7 271 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 RFPL4AA6NLU0 287 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 LRRC30A6NM36 301 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 CLDN25C9JDP6 229 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PPIAL4DF5H284 164 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 RFPL4AL1F8VTS6 287 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 LYNX1G3V0Z9 82 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SULT1C2O00338 296 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 SIGLEC5O15389 551 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 NDUFA2O43678 99 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 CRTAPO75718 401 aaPredicted RBP4.4□□□□□ -1.71
C9orf3-205ENST00000427193 NXPH2O95156 264 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 HAND1O96004 215 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 WNT2P09544 360 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L2P0CJ85 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L3P0CJ86 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L4P0CJ87 422 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L5P0CJ88 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L6P0CJ89 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 DUX4L7P0CJ90 424 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PPIAL4FP0DN26 164 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 LYNX1P0DP58 116 aa4.4□□□□□ -1.71
C9orf3-205ENST00000427193 PRKACAP17612 351 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms