RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 NEURL1O76050 574 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 GNG3P63215 75 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 HLA-DRB3P79483 266 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 FOXO1Q12778 655 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 ASCL3Q9NQ33 180 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 OTX1P32242 354 aaPredicted RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 SRSF6Q13247 344 aaKnown RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 OR8G1Q15617 311 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 GINS3Q9BRX5 216 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 LYRM2Q9NU23 88 aaPredicted RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 OR2W1Q9Y3N9 320 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 IFNL4K9M1U5 179 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 ZNF737O75373 536 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 FKBP2P26885 142 aaKnown RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 SSTR5P35346 364 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 SLC38A11Q08AI6 406 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 GALNT14Q96FL9 552 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
USP42-203ENST00000426246 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
USP42-203ENST00000426246 C5orf52A6NGY3 159 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 K7N7A8 449 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 ACTL6BO94805 426 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 OR2H2O95918 312 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 CD33P20138 364 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 FGF7P21781 194 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 FGF12P61328 243 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 FAM201AQ5SY85 155 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 ZNF66Q6ZN08 573 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 CCDC54Q8NEL0 328 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
USP42-203ENST00000426246 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
USP42-203ENST00000426246 TRGC1P0CF51 173 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 OR51G1Q8NGK1 321 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 ATP5SQ99766 215 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 GCM1Q9NP62 436 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 TRAV24A0A0B4J272 114 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 CDS2O95674 445 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 SRP19P09132 144 aaKnown RBP11.34□□□□□ -0.59
USP42-203ENST00000426246 SSTP61278 116 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 SRPXP78539 464 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 GAMTQ14353 236 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 LFNGQ8NES3 379 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
USP42-203ENST00000426246 TRAV38-1A0A0B4J264 116 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 PAGE4O60829 102 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 ZG16O60844 167 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 S100A8P05109 93 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 ICAM4Q14773 271 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
USP42-203ENST00000426246 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
USP42-203ENST00000426246 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
USP42-203ENST00000426246 ATP23Q9Y6H3 246 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
USP42-203ENST00000426246 RAB4BP61018 213 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 HBG1P69891 147 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 HBG2P69892 147 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 SLC35B1P78383 322 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 FFAR4Q5NUL3 377 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 FGFRL1Q8N441 504 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 CA5BP1Q8WTZ4 195 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 TANC2Q9HCD6 1990 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 H7BYZ3 331 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 AQP7O14520 342 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 FCGR3BO75015 233 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 CTSSP25774 331 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 C1orf87Q8N0U7 546 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 SSC4DQ8WTU2 575 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 NUDT16L1Q9BRJ7 211 aaKnown RBP11.33□□□□□ -0.6
USP42-203ENST00000426246 TAAR3PQ9P1P4 343 aa11.33□□□□□ -0.6
USP42-203ENST00000426246 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
USP42-203ENST00000426246 CEACAM18A8MTB9 384 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 SPSB3Q6PJ21 355 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
USP42-203ENST00000426246 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 A0A1W2PPV4 95 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
USP42-203ENST00000426246 WNT5AP41221 380 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 THBS3P49746 956 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 ASPHD1Q5U4P2 390 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 SCCPDHQ8NBX0 429 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 FAM173AQ9BQD7 235 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 PCGF1Q9BSM1 259 aa11.32□□□□□ -0.6
USP42-203ENST00000426246 COL25A1Q9BXS0 654 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms