RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZFP57Q9NU63 452 aa21.97■■□□□ 1.11
LDB1-202ENST00000425280 PSG11Q9UQ72 335 aa21.97■■□□□ 1.11
LDB1-202ENST00000425280 ST8SIA5O15466 376 aa21.97■■□□□ 1.11
LDB1-202ENST00000425280 TCF23Q7RTU1 214 aa21.97■■□□□ 1.11
LDB1-202ENST00000425280 ST8SIA3O43173 380 aa21.96■■□□□ 1.11
LDB1-202ENST00000425280 OMGP23515 440 aa21.96■■□□□ 1.11
LDB1-202ENST00000425280 ABHD14BQ96IU4 210 aa21.96■■□□□ 1.11
LDB1-202ENST00000425280 POMT1Q9Y6A1 747 aa21.96■■□□□ 1.11
LDB1-202ENST00000425280 HIVEP3Q5T1R4 2406 aa21.96■■□□□ 1.11
LDB1-202ENST00000425280 TRGV10A0A0A0MS01 117 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 PIGBOS1A0A0B4J2F0 54 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 A0A0G2JRQ6 117 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 E5RGE8 158 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 YPEL1O60688 119 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 EDARADDQ8WWZ3 215 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 YPEL2Q96QA6 119 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 NSG2Q9Y328 171 aa21.95■■□□□ 1.11
LDB1-202ENST00000425280 KBTBD11-OT1A0A1B0GTJ5 212 aa21.95■■□□□ 1.1
LDB1-202ENST00000425280 ZG16O60844 167 aa21.95■■□□□ 1.1
LDB1-202ENST00000425280 RPL12P30050 165 aaKnown RBP21.95■■□□□ 1.1
LDB1-202ENST00000425280 RAB14P61106 215 aa21.95■■□□□ 1.1
LDB1-202ENST00000425280 RPL30P62888 115 aaKnown RBP21.95■■□□□ 1.1
LDB1-202ENST00000425280 THOC7Q6I9Y2 204 aaKnown RBP21.95■■□□□ 1.1
LDB1-202ENST00000425280 CYTL1Q9NRR1 136 aa21.95■■□□□ 1.1
LDB1-202ENST00000425280 CLN8Q9UBY8 286 aa21.95■■□□□ 1.1
LDB1-202ENST00000425280 IGHV1-69-2A0A0G2JMI3 117 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 TNFRSF13BO14836 293 aaPredicted RBP21.94■■□□□ 1.1
LDB1-202ENST00000425280 SDHAF2Q9NX18 166 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 RCL1Q9Y2P8 373 aaKnown RBP21.94■■□□□ 1.1
LDB1-202ENST00000425280 NKX2-1P43699 371 aaPredicted RBP21.94■■□□□ 1.1
LDB1-202ENST00000425280 BTNL3Q6UXE8 466 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 DMBX1Q8NFW5 382 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 GPR146Q96CH1 333 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 RAB9BQ9NP90 201 aa21.94■■□□□ 1.1
LDB1-202ENST00000425280 LINC00862A6NCI5 91 aa21.93■■□□□ 1.1
LDB1-202ENST00000425280 CLDN14O95500 239 aa21.93■■□□□ 1.1
LDB1-202ENST00000425280 NDUFB7P17568 137 aa21.93■■□□□ 1.1
LDB1-202ENST00000425280 ITLN2Q8WWU7 325 aaPredicted RBP21.93■■□□□ 1.1
LDB1-202ENST00000425280 CORO2AQ92828 525 aa21.93■■□□□ 1.1
LDB1-202ENST00000425280 PLEKHA2Q9HB19 425 aa21.93■■□□□ 1.1
LDB1-202ENST00000425280 SLC25A10Q9UBX3 287 aaPredicted RBP21.93■■□□□ 1.1
LDB1-202ENST00000425280 S100A1P23297 94 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 CXorf66Q5JRM2 361 aaPredicted RBP21.92■■□□□ 1.1
LDB1-202ENST00000425280 LSM10Q969L4 123 aaKnown RBP21.92■■□□□ 1.1
LDB1-202ENST00000425280 ZC4H2Q9NQZ6 224 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 FCN3O75636 299 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 IGKV1-5P01602 117 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 Q3ZCU0 254 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 STOML3Q8TAV4 291 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 FAM216AQ8WUB2 273 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 C11orf1Q9H5F2 150 aa21.92■■□□□ 1.1
LDB1-202ENST00000425280 EPHA1P21709 976 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 CATR1Q13166 79 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 UTF1Q5T230 341 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 LYPD2Q6UXB3 125 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 GFOD1Q9NXC2 390 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 A0A1B0GU03 582 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 ZNF729A6NN14 1252 aaPredicted RBP21.91■■□□□ 1.1
LDB1-202ENST00000425280 IGHV3-7P01780 117 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 SLC25A6P12236 298 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 LPAR6P43657 344 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 ZNF134P52741 427 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 POLR2GP62487 172 aaKnown RBP eCLIP21.91■■□□□ 1.1
LDB1-202ENST00000425280 RNASE11Q8TAA1 199 aaKnown RBP21.91■■□□□ 1.1
LDB1-202ENST00000425280 LINC00574Q9H8X3 128 aa21.91■■□□□ 1.1
LDB1-202ENST00000425280 RAMP3O60896 148 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 PITX3O75364 302 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 CLDN1O95832 211 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 GPR12P47775 334 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 P2RY1P47900 373 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 ID3Q02535 119 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 IZUMO4Q1ZYL8 232 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 ZNF66Q6ZN08 573 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 TCTEX1D2Q8WW35 142 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 FAM210AQ96ND0 272 aa21.9■■□□□ 1.1
LDB1-202ENST00000425280 BRWD1-AS2P59051 145 aa21.89■■□□□ 1.1
LDB1-202ENST00000425280 OR2B11Q5JQS5 317 aa21.89■■□□□ 1.1
LDB1-202ENST00000425280 Q6ZRM9 215 aa21.89■■□□□ 1.1
LDB1-202ENST00000425280 PHYHIPLQ96FC7 376 aa21.89■■□□□ 1.1
LDB1-202ENST00000425280 hADV38S2A0JD32 116 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 C17orf98A8MV24 154 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 NMBP08949 121 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 AGAP20933 346 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 PPOXP50336 477 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 AKR1C2P52895 323 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 HFEQ30201 348 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 HSD17B10Q99714 261 aaKnown RBP21.89■■□□□ 1.09
LDB1-202ENST00000425280 MAGT1Q9H0U3 335 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 IFI27L2Q9H2X8 130 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 C19orf12Q9NSK7 152 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 IDI2-AS1Q9NZ38 188 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 LINC00312Q9Y6C7 94 aa21.89■■□□□ 1.09
LDB1-202ENST00000425280 LINC00473A8K010 186 aa21.88■■□□□ 1.09
LDB1-202ENST00000425280 PROP1O75360 226 aa21.88■■□□□ 1.09
LDB1-202ENST00000425280 TPT1P13693 172 aaKnown RBP21.88■■□□□ 1.09
LDB1-202ENST00000425280 LEAP2Q969E1 77 aa21.88■■□□□ 1.09
LDB1-202ENST00000425280 AUP1Q9Y679 476 aa21.88■■□□□ 1.09
LDB1-202ENST00000425280 ACACBO00763 2458 aa21.88■■□□□ 1.09
LDB1-202ENST00000425280 ITGB1BP1O14713 200 aa21.87■■□□□ 1.09
LDB1-202ENST00000425280 TAAR5O14804 337 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms