RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KCNJ8Q15842 424 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 NXNL2Q5VZ03 156 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GLYATQ6IB77 296 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 HAGHLQ6PII5 290 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 FBXW12Q6X9E4 464 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 CLEC20AQ6ZU45 233 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 LINC00173Q6ZV60 143 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 STRADAQ7RTN6 431 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TCF23Q7RTU1 214 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF329Q86UD4 541 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM61Q8N0U2 210 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 SLC30A7Q8NEW0 376 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 NUP35Q8NFH5 326 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 OR2T4Q8NH00 348 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 NPRL2Q8WTW4 380 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TWIST2Q8WVJ9 160 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 REEP6Q96HR9 211 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 KCNS1Q96KK3 526 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 LINC01587Q99440 93 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM147Q9BVK8 224 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 C1QTNF4Q9BXJ3 329 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 C20orf27Q9GZN8 174 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 COMMD5Q9GZQ3 224 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM222Q9H0R3 208 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 CDC42EP4Q9H3Q1 356 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 JPT2Q9H910 190 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF702PQ9H963 129 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GPR84Q9NQS5 396 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DAZ1Q9NQZ3 744 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 PARP11Q9NR21 331 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 GNG8Q9UK08 70 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 KLF13Q9Y2Y9 288 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 HEY1Q9Y5J3 304 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 PCYT1BQ9Y5K3 369 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 PXMP4Q9Y6I8 212 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 RALGAPA1Q6GYQ0 2036 aa2.79□□□□□ -1.96
SF3B1-205ENST00000424674 ZCCHC11Q5TAX3 1644 aaKnown RBP2.79□□□□□ -1.96
SF3B1-205ENST00000424674 BICRAQ9NZM4 1560 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 A2MP01023 1474 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 MED23Q9ULK4 1368 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 hCG_1818297A0A087WSY0 165 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 A0A087WYN8 130 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 IGKV1-8A0A0C4DH67 115 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 NKX2-6A6NCS4 301 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 RIIAD1A6NNX1 92 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 A8MT66 165 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 INMT-MINDY4F8WBC2 141 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 SAP18O00422 153 aaKnown RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 SLC22A1O15245 554 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 LINC01565O15544 149 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 IFNA7P01567 189 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 BGLAPP02818 100 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 SCGB1C2P0DMR2 95 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 CTSEP14091 401 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 FOLR2P14207 255 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 CPMP14384 443 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 RPS4Y1P22090 263 aaKnown RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 CCL1P22362 96 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 PPIBP23284 216 aaKnown RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 CNTFRP26992 372 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 BLVRBP30043 206 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 RPL34P49207 117 aaKnown RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 MEF2CQ06413 473 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 EGFEM1PQ0D2K5 195 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 LTC4SQ16873 150 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 C12orf74Q32Q52 190 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 TIMM50Q3ZCQ8 353 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ABCA11PQ4W5N1 156 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 MORN2Q502X0 79 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 C19orf48Q6RUI8 117 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ARL9Q6T311 187 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 PLET1Q6UQ28 207 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 REG3GQ6UW15 175 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 Q6ZSR6 202 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 MDP1Q86V88 176 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM86AQ8N2M4 240 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 SCGB1C1Q8TD33 95 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 GPR119Q8TDV5 335 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ORAOV1Q8WV07 137 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 DCUN1D4Q92564 292 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 C14orf144Q96I85 54 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 YPEL4Q96NS1 127 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 PGLYRP2Q96PD5 576 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 TSPAN32Q96QS1 320 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ATOH8Q96SQ7 321 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 NMNAT3Q96T66 252 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF649Q9BS31 505 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 CHCHD5Q9BSY4 110 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM243Q9BU79 118 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 PAXXQ9BUH6 204 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 PDCD10Q9BUL8 212 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 LINC00597Q9H2U6 94 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 Q9H3A6 140 aa2.78□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF331Q9NQX6 463 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-205ENST00000424674 NEUROG3Q9Y4Z2 214 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms