RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 YPEL4Q96NS1 127 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 OR2S2Q9NQN1 319 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 LSM5Q9Y4Y9 91 aaKnown RBP13.95□□□□□ -0.18
CMTM3-202ENST00000424011 MAP1BP46821 2468 aaKnown RBP13.95□□□□□ -0.18
CMTM3-202ENST00000424011 A0A0G2JNJ9 132 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 PHF1O43189 567 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-202ENST00000424011 SCGB1D2O95969 90 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 IGHV3-13P01766 116 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 GNRHRP30968 328 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 EIF5AP63241 154 aaKnown RBP13.95□□□□□ -0.18
CMTM3-202ENST00000424011 NHLH2Q02577 135 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 LGI3Q8N145 548 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 GAPTQ8N292 157 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 TP53RKQ96S44 253 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 CABLES2Q9BTV7 478 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 TAAR3PQ9P1P4 343 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 Q9UFV3 132 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 DUSP13Q9UII6 198 aa13.95□□□□□ -0.18
CMTM3-202ENST00000424011 IGKV1-6A0A0C4DH72 117 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 LMO1P25800 156 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 S100GP29377 79 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 RPS10P46783 165 aaKnown RBP13.94□□□□□ -0.18
CMTM3-202ENST00000424011 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-202ENST00000424011 SELENOVP59797 346 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 RND3P61587 244 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 FAM27E3Q08E93 113 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 WDR82Q6UXN9 313 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 LYPD6BQ8NI32 183 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
CMTM3-202ENST00000424011 IGHV3-64DA0A0J9YX35 117 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 MPPED1O15442 326 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 OR8U9P0C7N5 309 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 CD200P41217 278 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 NKX6-1P78426 367 aaPredicted RBP13.93□□□□□ -0.18
CMTM3-202ENST00000424011 SMIM21Q3B7S5 101 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 CMTM1Q8IZ96 169 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 OR2Z1Q8NG97 314 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 PRR7Q8TB68 274 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 RAB24Q969Q5 203 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 NPIPB11E5RHQ5 1161 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 C16orf97H3BN30 126 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 MBPP02686 304 aaPredicted RBP13.93□□□□□ -0.18
CMTM3-202ENST00000424011 RPL12P30050 165 aaKnown RBP13.93□□□□□ -0.18
CMTM3-202ENST00000424011 PRAMEF6Q5VXH4 476 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 ACP7Q6ZNF0 438 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 OR14J1Q9UGF5 321 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 CHD8Q9HCK8 2581 aa13.93□□□□□ -0.18
CMTM3-202ENST00000424011 INTS1Q8N201 2190 aaKnown RBP13.93□□□□□ -0.18
CMTM3-202ENST00000424011 ELOA3CA0A087WX78 387 aaPredicted RBP13.92□□□□□ -0.18
CMTM3-202ENST00000424011 IGKV1D-13A0A0B4J2D9 117 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 C3orf85A0A1B0GTC6 90 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 IFNL4K9M1U5 179 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 IGKV1-13P0DP09 117 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 PCSK4Q6UW60 755 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 Q6ZRG5 221 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 ZNF826PQ6ZT77 177 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 TAF9BQ9HBM6 251 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 OR2W1Q9Y3N9 320 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 WIPI2Q9Y4P8 454 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 PIGBOS1A0A0B4J2F0 54 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 K7EPK0 472 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 MBP02144 154 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 KHDC3LQ587J8 217 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 RPL7L1Q6DKI1 246 aaKnown RBP13.92□□□□□ -0.18
CMTM3-202ENST00000424011 MEX3BQ6ZN04 569 aaKnown RBP13.92□□□□□ -0.18
CMTM3-202ENST00000424011 ZNF818PQ6ZRF7 136 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 FAM71E2Q8N5Q1 922 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 OR52M1Q8NGK5 317 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 OR5R1Q8NH85 324 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 PLPPR1Q8TBJ4 325 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 MBNL3Q9NUK0 354 aaKnown RBP13.92□□□□□ -0.18
CMTM3-202ENST00000424011 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
CMTM3-202ENST00000424011 MED19A0JLT2 244 aaPredicted RBP13.91□□□□□ -0.18
CMTM3-202ENST00000424011 TMEM30CPA0ZSE6 113 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 PPP1R2P9O14990 202 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 OR2C1O95371 312 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 PTBP3O95758 552 aaKnown RBP13.91□□□□□ -0.18
CMTM3-202ENST00000424011 TNFRSF9Q07011 255 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 PRR30Q53SZ7 412 aaPredicted RBP13.91□□□□□ -0.18
CMTM3-202ENST00000424011 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 SPNS3Q6ZMD2 512 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 TBC1D26Q86UD7 250 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 H1FOOQ8IZA3 346 aaPredicted RBP13.91□□□□□ -0.18
CMTM3-202ENST00000424011 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 IGLV3-9A0A075B6K5 115 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 A8MWP6 167 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 CD40P25942 277 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 COMMD1Q8N668 190 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 TMEM171Q8WVE6 324 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 NDUFAF3Q9BU61 184 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 PRORYQ9H606 182 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 KCNIP1Q9NZI2 227 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 JKAMPQ9P055 326 aa13.91□□□□□ -0.18
CMTM3-202ENST00000424011 DSPP15924 2871 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms