RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 IGKV1-33P01594 117 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
CDH1-202ENST00000422392 ZNF808Q8N4W9 903 aaPredicted RBP13.31□□□□□ -0.28
CDH1-202ENST00000422392 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 WDR61Q9GZS3 305 aaKnown RBP13.31□□□□□ -0.28
CDH1-202ENST00000422392 HIPK2Q9H2X6 1198 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 RBKSQ9H477 322 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 S100PP25815 95 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 G6PCP35575 357 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 LINC00205P59089 165 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 ZNF826PQ6ZT77 177 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 OR1L1Q8NH94 360 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 C5orf30Q96GV9 206 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 SPRR3Q9UBC9 169 aa13.31□□□□□ -0.28
CDH1-202ENST00000422392 LNP1A1A4G5 178 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 MAP1LC3B2A6NCE7 125 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 WNT9BO14905 357 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 SMPD2O60906 423 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 CLDN1O95832 211 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 SOD3P08294 240 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 ERVK11-1P61568 191 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 HBG1P69891 147 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 HBG2P69892 147 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 SLC10A1Q14973 349 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 TBC1D28Q2M2D7 210 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 GCNT2Q8N0V5 402 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 GPR61Q9BZJ8 451 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 MAP1LC3BQ9GZQ8 125 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 OR2D2Q9H210 308 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 HCFC1P51610 2035 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 LYZL6O75951 148 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 MPLP40238 635 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 OR3A1P47881 315 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 PPP1CBP62140 327 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
CDH1-202ENST00000422392 SLC38A11Q08AI6 406 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 SLC25A40Q8TBP6 338 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 ABHD5Q8WTS1 349 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 FRZBQ92765 325 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 CLN8Q9UBY8 286 aa13.3□□□□□ -0.28
CDH1-202ENST00000422392 LRP5LA4QPB2 252 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 CXorf65A6NEN9 183 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 DEFA4P12838 97 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 SPINK9Q5DT21 86 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 BTNL3Q6UXE8 466 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 TMPRSS7Q7RTY8 843 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
CDH1-202ENST00000422392 OR52L2PQ8NGH6 319 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 TAF15Q92804 592 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDH1-202ENST00000422392 FAM210BQ96KR6 192 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
CDH1-202ENST00000422392 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
CDH1-202ENST00000422392 GAR1Q9NY12 217 aaKnown RBP13.29□□□□□ -0.28
CDH1-202ENST00000422392 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 PGA5P0DJD9 388 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 PMP22Q01453 160 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 MOB1BQ7L9L4 216 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 TPRX1Q8N7U7 411 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 OR10D4PQ8NGN7 298 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
CDH1-202ENST00000422392 TINAGQ9UJW2 476 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 PCNX2A6NKB5 2137 aa13.29□□□□□ -0.28
CDH1-202ENST00000422392 SH2D1BO14796 132 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 S100A2P29034 98 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 AESQ08117 197 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 TMEM41BQ5BJD5 291 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 OR10G4Q8NGN3 311 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
CDH1-202ENST00000422392 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 SLC25A22Q9H936 323 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
CDH1-202ENST00000422392 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 ZNF737O75373 536 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 PSG7Q13046 419 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 C9orf152Q5JTZ5 239 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 TMEM164Q5U3C3 297 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 ACSM6Q6P461 480 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 DBX2Q6ZNG2 339 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 MDS2Q8NDY4 140 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 GATAD1Q8WUU5 269 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 LHX4Q969G2 390 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 ZDHHC16Q969W1 377 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 GUCD1Q96NT3 240 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 TREM2Q9NZC2 230 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 POLDIP2Q9Y2S7 368 aa13.28□□□□□ -0.28
CDH1-202ENST00000422392 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
CDH1-202ENST00000422392 C12orf77C9JDV5 145 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 S1PR2O95136 353 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 HAND1O96004 215 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 CYB5R3P00387 301 aaPredicted RBP13.27□□□□□ -0.28
CDH1-202ENST00000422392 WNT2P09544 360 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 MPV17P39210 176 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 SERF2P84101 59 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 ZNF146Q15072 292 aa13.27□□□□□ -0.28
CDH1-202ENST00000422392 Q6ZR03 302 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms