RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 COX5AP20674 150 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 VDAC1P21796 283 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 PSMB3P49720 205 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 UBE2G1P62253 170 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 CALHM1Q8IU99 346 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 KCNRGQ8N5I3 272 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 UQCC1Q9NVA1 299 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 ELF5Q9UKW6 265 aaPredicted RBP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 C9orf170A2RU37 121 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 LEUTXA8MZ59 168 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 G6PCP35575 357 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 HTD2P86397 168 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 RPUSD3Q6P087 351 aaKnown RBP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 SLC25A22Q9H936 323 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF835Q9Y2P0 537 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 DNASE2O00115 360 aaPredicted RBP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 PLA2G10O15496 165 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 B3GALNT1O75752 331 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 LY86O95711 162 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 CT45A10P0DMU9 189 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 BMI1P35226 326 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 P2RX3P56373 397 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 WDFY1Q8IWB7 410 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 BVESQ8NE79 360 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 RNF138Q8WVD3 245 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 LYZL4Q96KX0 146 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 SSBP3Q9BWW4 388 aaPredicted RBP8.27□□□□□ -1.09
CMSS1-201ENST00000421999 FREM1Q5H8C1 2179 aa8.27□□□□□ -1.09
CMSS1-201ENST00000421999 MMP7P09237 267 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-201ENST00000421999 SSTR5P35346 364 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 TMEM33P57088 247 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 IL24Q13007 206 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 ETFRF1Q6IPR1 90 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 HOGA1Q86XE5 327 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 PAQR4Q8N4S7 273 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-201ENST00000421999 OR9G1Q8NH87 305 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 PTX4Q96A99 478 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 SSX3Q99909 188 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 DOK5Q9P104 306 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 LRP4O75096 1905 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 IGHV3-21A0A0B4J1V1 117 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 A0A0G2JK05 382 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 CRYGSP22914 178 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 RAB32Q13637 225 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 OR10A7Q8NGE5 316 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 C14orf79Q96F83 325 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 RAB40CQ96S21 281 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 TMEM147Q9BVK8 224 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 CLEC7AQ9BXN2 247 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 RPS10P5Q9NQ39 176 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 IDI2-AS1Q9NZ38 188 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 V9GYS6 101 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 DUS4LO95620 317 aaKnown RBP8.26□□□□□ -1.09
CMSS1-201ENST00000421999 PRB1P04280 392 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 SURF2Q15527 256 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF474Q6S9Z5 364 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-201ENST00000421999 SEZ6L2Q6UXD5 910 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 LRP11Q86VZ4 500 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 WBP1Q96G27 269 aa8.26□□□□□ -1.09
CMSS1-201ENST00000421999 FAM24AA6NFZ4 105 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SH2D7A6NKC9 451 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 CTDSPLO15194 276 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ICMTO60725 284 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ORM2P19652 201 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 TMEM255AQ5JRV8 349 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SOHLH1Q5JUK2 328 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 CLEC18BQ6UXF7 455 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ZNF561Q8N587 486 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SLA2Q9H6Q3 261 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 POMT1Q9Y6A1 747 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 PCNX3Q9H6A9 2034 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 DVL1O14640 695 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 THBDP07204 575 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 RRASP10301 218 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 PSG2P11465 335 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 CHATP28329 748 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 MC5RP33032 325 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 CD200P41217 278 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 ZBTB34Q8NCN2 500 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 POM121Q96HA1 1249 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 GPHA2Q96T91 129 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 NRIP2Q9BQI9 281 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 GON7Q9BXV9 100 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 IGKV1-9A0A0C4DH69 117 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 J3QR06 171 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 GSTZ1O43708 216 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SYNGR2O43760 224 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SLC25A17O43808 307 aa8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SNRNP70P08621 437 aaKnown RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 PRB3Q04118 309 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 SP5Q6BEB4 398 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-201ENST00000421999 LIAT1Q6ZQX7 453 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms