RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 WIPI2Q9Y4P8 454 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ANKHD1Q8IWZ3 2542 aaKnown RBP7.35□□□□□ -1.23
SNCA-206ENST00000420646 ARFGEF3Q5TH69 2177 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 H0Y980 276 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 PRRG2O14669 202 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 CD80P33681 288 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 RND3P61587 244 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 ZNF616Q08AN1 781 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 TMEM267Q0VDI3 215 aaPredicted RBP7.35□□□□□ -1.23
SNCA-206ENST00000420646 HMGN3Q15651 99 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 Q6ZRG5 221 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 OR5C1Q8NGR4 320 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 KCNIP1Q9NZI2 227 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 CD40P25942 277 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 G6PCP35575 357 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 MDH2P40926 338 aaKnown RBP7.35□□□□□ -1.23
SNCA-206ENST00000420646 PAX9P55771 341 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 BRWD1-AS2P59051 145 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 NKX6-1P78426 367 aaPredicted RBP7.35□□□□□ -1.23
SNCA-206ENST00000420646 SMIM21Q3B7S5 101 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 ADAM5Q6NVV9 412 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 FIP1L1Q6UN15 594 aaKnown RBP7.35□□□□□ -1.23
SNCA-206ENST00000420646 ZNF295-AS1Q8N0V1 137 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 TMEM252Q8N6L7 170 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 LRRC46Q96FV0 321 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 PLEKHA2Q9HB19 425 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 TREM1Q9NP99 234 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 RAXQ9Y2V3 346 aa7.35□□□□□ -1.23
SNCA-206ENST00000420646 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 TXNL1O43396 289 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 GPR137BO60478 399 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 JTBO76095 146 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 MUC1P15941 1255 aaPredicted RBP7.34□□□□□ -1.23
SNCA-206ENST00000420646 LMO1P25800 156 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 DYNLT3P51808 116 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 ID3Q02535 119 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 KRTCAP3Q53RY4 240 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 TMEM88Q6PEY1 159 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 OR5D13Q8NGL4 314 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 MEGF10Q96KG7 1140 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 TLNRD1Q9H1K6 362 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 YLPM1P49750 1951 aaKnown RBP7.34□□□□□ -1.23
SNCA-206ENST00000420646 C17orf98A8MV24 154 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 KIAA1324LA8MWY0 1029 aaPredicted RBP7.34□□□□□ -1.23
SNCA-206ENST00000420646 ZNF737O75373 536 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 GLRXP35754 106 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 VAMP2P63027 116 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 SHEQ5VZ18 495 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 TMEM182Q6ZP80 229 aaPredicted RBP7.34□□□□□ -1.23
SNCA-206ENST00000420646 NEUROG1Q92886 237 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 SFXN3Q9BWM7 321 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 C11orf1Q9H5F2 150 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 RNF115Q9Y4L5 304 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 CRYBG3Q68DQ2 2970 aa7.34□□□□□ -1.23
SNCA-206ENST00000420646 DPRXA6NFQ7 191 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 FAM74A7A6NL05 159 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 LINC00473A8K010 186 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 TAAR5O14804 337 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 PRH1P02810 166 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 P2RY1P47900 373 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 EIF4E3Q8N5X7 224 aaKnown RBP7.34□□□□□ -1.24
SNCA-206ENST00000420646 UBAC2Q8NBM4 344 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 PIGMQ9H3S5 423 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 RHOFQ9HBH0 211 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 ZNRD1Q9P1U0 126 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 GLS2Q9UI32 602 aa7.34□□□□□ -1.24
SNCA-206ENST00000420646 CREBBPQ92793 2442 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 TMEM218A2RU14 115 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 SRRM5B3KS81 715 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 PROP1O75360 226 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 METTL15P1P0C7V9 234 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 ZNF134P52741 427 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 SRPXP78539 464 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 BSPH1Q075Z2 132 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 Q3ZCU0 254 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 VKORC1L1Q8N0U8 176 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 SMIM8Q96KF7 97 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 GCM1Q9NP62 436 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 MED13LQ71F56 2210 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 OOEPA6NGQ2 149 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 K7ENP7 123 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 GPR37O15354 613 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 S1PR2O95136 353 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 IGHV1-46P01743 117 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 THBDP07204 575 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 SULT1A2P50226 295 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 ARL16Q0P5N6 197 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 MIDNQ504T8 468 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 AKIRIN2Q53H80 203 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 SLC35E4Q6ICL7 350 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 C1orf229Q6ZS94 237 aaPredicted RBP7.33□□□□□ -1.24
SNCA-206ENST00000420646 MOB1BQ7L9L4 216 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 NINJ1Q92982 152 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 CCL13Q99616 98 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 LYRM2Q9NU23 88 aaPredicted RBP7.33□□□□□ -1.24
SNCA-206ENST00000420646 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
SNCA-206ENST00000420646 UTP20O75691 2785 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms