RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 ZNF561Q8N587 486 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 CLEC18CQ8NCF0 446 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 STOML3Q8TAV4 291 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 GLYATL2Q8WU03 294 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 IL1F10Q8WWZ1 152 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 RBPMSQ93062 196 aaKnown RBP6.04□□□□□ -1.44
EPHA4-205ENST00000419964 MSI2Q96DH6 328 aaKnown RBP6.04□□□□□ -1.44
EPHA4-205ENST00000419964 C18orf12Q96KH6 178 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 OR2V2Q96R30 315 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 ZNF471Q9BX82 626 aaPredicted RBP6.04□□□□□ -1.44
EPHA4-205ENST00000419964 FAM234AQ9H0X4 552 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 TAF9BQ9HBM6 251 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 ZC4H2Q9NQZ6 224 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 ASF1BQ9NVP2 202 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 OR6C3Q9NZP0 311 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 GSKIPQ9P0R6 139 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 ZNF581Q9P0T4 197 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 RNF7Q9UBF6 113 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 IL36RNQ9UBH0 155 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 CNTRLQ7Z7A1 2325 aa6.04□□□□□ -1.44
EPHA4-205ENST00000419964 FREM1Q5H8C1 2179 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 ZFHX2Q9C0A1 2572 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 TRGV8A0A0C4DH27 118 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 RNF222A6NCQ9 220 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 ATP6V1G2-DDX39BF2Z307 99 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 DEDDO75618 318 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 JTBO76095 146 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 LHBP01229 141 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 GAPDHP04406 335 aaKnown RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 HEXAP06865 529 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 F2RP25116 425 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 CA7P43166 264 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 P2RY1P47900 373 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 S100A10P60903 97 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 SUMO2P61956 95 aaKnown RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 TNFAIP6P98066 277 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 ATXN7L3Q14CW9 347 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 HERPUD1Q15011 391 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 KRBOX4Q5JUW0 171 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 PRAMEF6Q5VXH4 476 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 TMEM268Q5VZI3 342 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 ZNF818PQ6ZRF7 136 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 FAM219AQ8IW50 185 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 SLC7A5P1Q8MH63 180 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 C11orf44Q8N8P7 122 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 FAM222BQ8WU58 562 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 LSM10Q969L4 123 aaKnown RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 OR10C1Q96KK4 312 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 SHARPINQ9H0F6 387 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 LIME1Q9H400 295 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 UFSP2Q9NUQ7 469 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 ERRFI1Q9UJM3 462 aaPredicted RBP6.03□□□□□ -1.44
EPHA4-205ENST00000419964 AUP1Q9Y679 476 aa6.03□□□□□ -1.44
EPHA4-205ENST00000419964 DMXL1Q9Y485 3027 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 A0A1B0GU03 582 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 NKX6-3A6NJ46 265 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ZSCAN5BA6NJL1 495 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 LINC00473A8K010 186 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 WRBO00258 174 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ABCD4O14678 606 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ITGB1BP1O14713 200 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 PGLYRP1O75594 196 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RRASP10301 218 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 PSG2P11465 335 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RCC1P18754 421 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RPL12P30050 165 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 CEACAM6P40199 344 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 NKX2-1P43699 371 aaPredicted RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 OR3A1P47881 315 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ARHGDIBP52566 201 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 COL10A1Q03692 680 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 SNTB1Q13884 538 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 FHL2Q14192 279 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 MEX3BQ6ZN04 569 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ZNF66Q6ZN08 573 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 Q6ZWC4 215 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 BAP18Q8IXM2 172 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 ZNF645Q8N7E2 425 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 SLC35G3Q8N808 338 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RNASE11Q8TAA1 199 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 CD300LFQ8TDQ1 290 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RNASE6Q93091 150 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RAB39BQ96DA2 213 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 RNF126Q9BV68 326 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 MRPL37Q9BZE1 423 aaKnown RBP6.02□□□□□ -1.45
EPHA4-205ENST00000419964 SLC25A31Q9H0C2 315 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 JPT1Q9UK76 154 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 FZR1Q9UM11 496 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 PPP1R3CQ9UQK1 317 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 POMT1Q9Y6A1 747 aa6.02□□□□□ -1.45
EPHA4-205ENST00000419964 TRAV38-1A0A0B4J264 116 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 IGKV1-6A0A0C4DH72 117 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 C17orf100A8MU93 164 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 B9A039 149 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 C12orf77C9JDV5 145 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 FAM90A26D6RGX4 464 aa6.01□□□□□ -1.45
EPHA4-205ENST00000419964 K7N7A8 449 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms