RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 THYN1Q9P016 225 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 DHCR7Q9UBM7 475 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 DKKL1Q9UK85 242 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR52A1Q9UKL2 312 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF346Q9UL40 294 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC22A13Q9Y226 551 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TP53TG5Q9Y2B4 290 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 KCNIP3Q9Y2W7 256 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MRPS18BQ9Y676 258 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 MTCH2Q9Y6C9 303 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 REV3LO60673 3130 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 GON4LQ3T8J9 2241 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 HEATR5AQ86XA9 2040 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MPDZO75970 2070 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 A0A1B0GTH9 108 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DUXBA0A1W2PPF3 345 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FAM230AA0A1W2PPH8 454 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 A0A1W2PRV1 198 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SMCO3A2RU48 225 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FRG2CA6NGY1 282 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CRYM-AS1A6NIL9 109 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR5H1A6NKK0 313 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF724A8MTY0 619 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SHISA9B4DS77 424 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF878C9JN71 531 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NPIPA5E9PKD4 350 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 MKRN2OSH3BPM6 223 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NPIPB7O75200 414 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 UTS2O95399 124 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 AHSA1O95433 338 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NSA2O95478 260 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 CDS2O95674 445 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PNPP00491 289 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GCGP01275 180 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 IFNA1P01562 189 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 IGKV1D-16P01601 117 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PMP2P02689 132 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 PRH1P02810 166 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 APODP05090 189 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SFTPBP07988 381 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR5AC1P0C628 307 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR8U9P0C7N5 309 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CT45A8P0DMV1 189 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CT45A9P0DMV2 189 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 LIPCP11150 499 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FOLR1P15328 257 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FOSL2P15408 326 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CBR1P16152 277 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF708P17019 499 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CCL1P22362 96 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DTYMKP23919 212 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GABRR1P24046 479 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DDTP30046 118 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GDI1P31150 447 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TAGLN2P37802 199 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 ACTR1BP42025 376 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RPS10P46783 165 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 CSNK1A1P48729 337 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TNFSF10P50591 281 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RND2P52198 227 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 METAP1P53582 386 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NDUFA6P56556 154 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TMEM33P57088 247 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DSCR10P59022 87 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR2B8PP59922 312 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 RPS23P62266 143 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 SUPT4H1P63272 117 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 TLE4Q04727 773 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZFP36L1Q07352 338 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 BAXQ07812 192 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF616Q08AN1 781 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 UNC119Q13432 240 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 FAM53BQ14153 422 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GNMTQ14749 295 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SLC9A3R2Q15599 337 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 OR8G1Q15617 311 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 UBE2V2Q15819 145 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 IAH1Q2TAA2 248 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 ANKRD55Q3KP44 614 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TMEM176BQ3YBM2 270 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 CHRFAM7AQ494W8 412 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ACSF3Q4G176 576 aaPredicted RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 AKIRIN2Q53H80 203 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 KHDC3LQ587J8 217 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CT45A2Q5DJT8 189 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF506Q5JVG8 444 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 AKR1C8PQ5T2L2 129 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 C1orf140Q5VVS0 124 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 CD164L2Q6UWJ8 174 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 GLIPR1L1Q6UWM5 242 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 VITQ6UXI7 678 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 NPSR1Q6W5P4 371 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 SLC35D2Q76EJ3 337 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 TIPARPQ7Z3E1 657 aaKnown RBP2.1□□□□□ -2.07
VPS41-206ENST00000418457 GRINAQ7Z429 371 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 DEFB128Q7Z7B8 93 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 ZNF101Q8IZC7 436 aa2.1□□□□□ -2.07
VPS41-206ENST00000418457 LGI3Q8N145 548 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms