RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TMEM196Q5HYL7 178 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 Q6ZSR6 202 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 TRAV9-1A0A075B6T8 112 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 TLX3O43711 291 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 NAPSAO96009 420 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 IGHEP01854 428 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 PSG2P11465 335 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 BMP5P22003 454 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 SLC25A53Q5H9E4 307 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 SPANXN5Q5MJ07 72 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM42Q69YG0 159 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 C16orf47Q6ZP98 133 aaPredicted RBP6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 SLC24A4Q8NFF2 622 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 NABP1Q96AH0 204 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 STRADBQ9C0K7 418 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 CHODLQ9H9P2 273 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 BET1LQ9NYM9 111 aa6.82□□□□□ -1.32
HMGXB4-202ENST00000418170 MDFIC2A0A1B0GVS7 189 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 CD300LBA8K4G0 201 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM166BA8MTA8 275 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 S100GP29377 79 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF542PQ5EBM4 170 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KLHDC1Q8N7A1 406 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 C12orf76Q8N812 135 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 NUDT10Q8NFP7 164 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 BADQ92934 168 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 GMPPAQ96IJ6 420 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OR6C1Q96RD1 312 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 PLEK2Q9NYT0 353 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 LOC102725191A0A1B0GVB3 256 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 SH2D1BO14796 132 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 EGR1P18146 543 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KITLGP21583 273 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TSPOP30536 169 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 MLF1P58340 268 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 C10orf128Q5T292 105 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 FOXL2NBQ6ZUU3 175 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 MCEMP1Q8IX19 187 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 SLC22A18ASQ8N1D0 253 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OR51H1Q8NH63 302 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 DERL1Q9BUN8 251 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 SOHLH2Q9NX45 425 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TBL2Q9Y4P3 447 aaKnown RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 CBY3A6NI87 242 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF253O75346 499 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 IGKV1-39P01597 117 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 IGKV1D-39P04432 117 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 CTXN2P0C2S0 81 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM14EPQ6UXP3 125 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OR1K1Q8NGR3 316 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 ZNF501Q96CX3 271 aaPredicted RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 SLC35D1Q9NTN3 355 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 CHTOPQ9Y3Y2 248 aaKnown RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KNL1Q8NG31 2342 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TRAV30A0A087WSZ9 112 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KIR2DS1A0A191URI9 304 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 PGPEP1LA6NFU8 196 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 M0QZ24 198 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 NDUFB4O95168 129 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 COX5AP20674 150 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 COL9A1P20849 921 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TNFSF4P23510 183 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TIMP3P35625 211 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KIR2DS4P43632 304 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 CAPZBP47756 277 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 PRSS12P56730 875 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OR1D5P58170 312 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KIR2DS1Q14954 304 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM103A1Q9BTL3 118 aaKnown RBP6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 LRFN3Q9BTN0 628 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 NRN1Q9NPD7 142 aa6.81□□□□□ -1.32
HMGXB4-202ENST00000418170 TRAV34A0A0B4J273 112 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 A0A1W2PQF6 199 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 A0A1W2PR80 420 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 TMEM11P17152 192 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 CD38P28907 300 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 NTSR1P30989 418 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FUT6P51993 359 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 PSG4Q00888 419 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 PHYHD1Q5SRE7 291 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 TCTEX1D1Q8N7M0 179 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 IFI44Q8TCB0 444 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 TRBV20OR9-2A0A075B6H5 130 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A10PA6NDY2 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A18PA6NE21 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A16PA6NEW6 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A20PA6NIJ5 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A8PA6NJQ4 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 FAM90A7PA6NKC0 464 aa6.8□□□□□ -1.32
HMGXB4-202ENST00000418170 AQP7P3A6NL99 342 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms