RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LUMP51884 338 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 P2RX3P56373 397 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 RPL23AP62750 156 aaKnown RBP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF497Q6ZNH5 498 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 RTN4RL2Q86UN3 420 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 IZUMO1Q8IYV9 350 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 PRR25Q96S07 402 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 ASCL2Q99929 193 aa10.19□□□□□ -0.78
LINC00339-202ENST00000416769 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 MRPS7Q9Y2R9 242 aaKnown RBP10.19□□□□□ -0.78
LINC00339-202ENST00000416769 MEIKINA0A087WXM9 373 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 ODAMA1E959 279 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 PSMB11A5LHX3 300 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 TMEM235A6NFC5 223 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 LINC01548A6NM66 108 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 LY6LH3BQJ8 138 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 SULT1C2O00338 296 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 NAPSAO96009 420 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 GZMHP20718 246 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 PRSS3P35030 304 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 GNG2P59768 71 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 MRPS15P82914 257 aaKnown RBP10.18□□□□□ -0.78
LINC00339-202ENST00000416769 ARFRP1Q13795 201 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00339-202ENST00000416769 TPTE2P1Q5T6R2 138 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 PYHIN1Q6K0P9 492 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 MRPL30Q8TCC3 161 aaKnown RBP10.18□□□□□ -0.78
LINC00339-202ENST00000416769 LEAP2Q969E1 77 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 CYYR1Q96J86 154 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 ABHD1Q96SE0 405 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 OR6C3Q9NZP0 311 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 KIF25Q9UIL4 384 aa10.18□□□□□ -0.78
LINC00339-202ENST00000416769 ELF5Q9UKW6 265 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-202ENST00000416769 CTDSPLO15194 276 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 DUS4LO95620 317 aaKnown RBP10.17□□□□□ -0.78
LINC00339-202ENST00000416769 CGB3P0DN86 165 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 CGB7P0DN87 165 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 CBX5P45973 191 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 IL18Q14116 193 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 HLA-DRB5Q30154 266 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF880Q6PDB4 577 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 FAM131AQ6UXB0 335 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF554Q86TJ5 538 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 KLHL30-AS1Q8NEE0 82 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 OR56B4Q8NH76 319 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 CAPSLQ8WWF8 208 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 P2RX4Q99571 388 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 SCPEP1Q9HB40 452 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
LINC00339-202ENST00000416769 TAS2R3Q9NYW6 316 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 TRAPPC2LQ9UL33 140 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 MGAT4AQ9UM21 535 aa10.17□□□□□ -0.78
LINC00339-202ENST00000416769 UBE2J1Q9Y385 318 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-202ENST00000416769 TRGV10A0A0A0MS01 117 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 BUB1B-PAK6H3BSN5 160 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 ORC5O43913 435 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 PTHLHP12272 177 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 DTYMKP23919 212 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 BRS3P32247 399 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 MRPS10P82664 201 aaKnown RBP10.16□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF45Q02386 682 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 HNF4GQ14541 408 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 C17orf58Q2M2W7 97 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 C6orf183Q5T699 404 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 TRAT1Q6PIZ9 186 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 HEPN1Q6WQI6 88 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 GPX8Q8TED1 209 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 S100ZQ8WXG8 99 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 HDHD3Q9BSH5 251 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-202ENST00000416769 CHMP1AQ9HD42 196 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-202ENST00000416769 Q9N2K0 584 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 C12orf4Q9NQ89 552 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 U3KQK5 164 aa10.16□□□□□ -0.78
LINC00339-202ENST00000416769 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF729A6NN14 1252 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-202ENST00000416769 NUDT19A8MXV4 375 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 LEUTXA8MZ59 168 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 SSX5O60225 188 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 NFYBP25208 207 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 RAB25P57735 213 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 MADCAM1Q13477 382 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 Q6ZS49 121 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 MOB1BQ7L9L4 216 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 DRAM1Q8N682 238 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 OR13A1Q8NGR1 328 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 ZNF596Q8TC21 504 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 NUDCD2Q8WVJ2 157 aa10.15□□□□□ -0.78
LINC00339-202ENST00000416769 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms