RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RP2O75695 350 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 SNRPCP09234 159 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 SSR2P43308 183 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 HSPA13P48723 471 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR4D2P58180 307 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 RFX4Q33E94 735 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 FAM27D1Q5T7N8 215 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OGFRL1Q5TC84 451 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 COX15Q7KZN9 410 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CLECL1Q8IZS7 167 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 WFDC11Q8NEX6 87 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR11H7Q8NGC8 314 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR2A1Q8NGT9 310 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR6N2Q8NGY6 317 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TYMSOSQ8TAI1 123 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 C16orf78Q8WTQ4 265 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CANT1Q8WVQ1 401 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 POP5Q969H6 163 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 AURKBQ96GD4 344 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 RNF145Q96MT1 663 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 NRTNQ99748 197 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 MS4A8Q9BY19 250 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 UGT2B28Q9BY64 529 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CCL28Q9NRJ3 127 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 ARMC1Q9NVT9 282 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 CMYA5Q8N3K9 4069 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 A0A1B0GUV1 79 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 KLLNB2CW77 178 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 SRRM5B3KS81 715 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CXCR6O00574 342 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 MPZL2O60487 215 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 GLSO94925 669 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 IL3P08700 152 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 G0S2P27469 103 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 HRH1P35367 487 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 GPX4P36969 197 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 TGFBR2P37173 567 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 AQP4P55087 323 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 ARF6P62330 175 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 PITPNAQ00169 270 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 LRRC10Q5BKY1 277 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 KDM4DQ6B0I6 523 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OOSP2Q86WS3 158 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 MSRB3Q8IXL7 192 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 NATD1Q8N6N6 113 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR5L1Q8NGL2 311 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CCDC115Q96NT0 180 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OSBPL11Q9BXB4 747 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 RSPO3Q9BXY4 272 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 REEP1Q9H902 201 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TPT1P8Q9HAU6 139 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 RHBDL2Q9NX52 303 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CTSZQ9UBR2 303 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 SPATA2Q9UM82 520 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 DNAH1Q9P2D7 4330 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 HEATR5BQ9P2D3 2071 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 IGKV1-8A0A0C4DH67 115 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 A0A0G2JN53 185 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 GNGT2O14610 69 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 SNAPINO95295 136 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 KRT75O95678 551 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 C6orf47O95873 294 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 STATHP02808 62 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 SLC35G6P0C7Q6 338 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 HOXB6P17509 224 aaKnown RBP1.9□□□□□ -2.1
MCF2-204ENST00000414978 SSR4P51571 173 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 GTF2A1P52655 376 aaPredicted RBP1.9□□□□□ -2.1
MCF2-204ENST00000414978 FGF8P55075 233 aaPredicted RBP1.9□□□□□ -2.1
MCF2-204ENST00000414978 PPP1CBP62140 327 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 GINS1Q14691 196 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 FAM71E1Q6IPT2 247 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 PLEKHG7Q6ZR37 379 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 FAM92BQ6ZTR7 304 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 MBOAT2Q6ZWT7 520 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 SKA3Q8IX90 412 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 SPICQ8N5J4 248 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 CHST4Q8NCG5 386 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 KLHL30-AS1Q8NEE0 82 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 OR13G1Q8NGZ3 307 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 FAM57AQ8TBR7 257 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 APOL4Q9BPW4 351 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 OR51J1Q9H342 316 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 ACOT13Q9NPJ3 140 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 EMC3Q9P0I2 261 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 ZNF223Q9UK11 482 aaPredicted RBP1.9□□□□□ -2.1
MCF2-204ENST00000414978 POLEQ07864 2286 aa1.9□□□□□ -2.1
MCF2-204ENST00000414978 CCDC88CQ9P219 2028 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 LAMA5O15230 3695 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 A6NDX4 124 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 B4DXG7 233 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 SLC17A2O00624 439 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 ZNF780AO75290 641 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 KLF7O75840 302 aaPredicted RBP1.9□□□□□ -2.11
MCF2-204ENST00000414978 ZNF682O95780 498 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 SERPINA1P01009 418 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 CHTF8P0CG12 524 aa1.9□□□□□ -2.11
MCF2-204ENST00000414978 GPX2P18283 190 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms