RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ODF3L1Q8IXM7 274 aa7.9□□□□□ -1.14
RIF1-202ENST00000414861 ZFAND1Q8TCF1 268 aa7.9□□□□□ -1.14
RIF1-202ENST00000414861 SIRPDQ9H106 197 aa7.9□□□□□ -1.14
RIF1-202ENST00000414861 PRR13Q9NZ81 148 aa7.9□□□□□ -1.14
RIF1-202ENST00000414861 IGHV2-26A0A0B4J1V2 119 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 C7orf66A4D0T2 115 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 GPR31O00270 319 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 PROP1O75360 226 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 MSMBP08118 114 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 MMP9P14780 707 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 UBE2MP61081 183 aaKnown RBP7.9□□□□□ -1.15
RIF1-202ENST00000414861 LOXL1Q08397 574 aaPredicted RBP7.9□□□□□ -1.15
RIF1-202ENST00000414861 DHRS2Q13268 280 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 ABCA11PQ4W5N1 156 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 C4orf46Q504U0 113 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 HCP5Q6MZN7 132 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 BTNL3Q6UXE8 466 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 GLDNQ6ZMI3 551 aaPredicted RBP7.9□□□□□ -1.15
RIF1-202ENST00000414861 CADM3Q8N126 398 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 KIR3DL3Q8N743 410 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 ZNF645Q8N7E2 425 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 BVESQ8NE79 360 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 TNFRSF14Q92956 283 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 SCGB3A2Q96PL1 93 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 FOXC2Q99958 501 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 GHITMQ9H3K2 345 aa7.9□□□□□ -1.15
RIF1-202ENST00000414861 TEX15Q9BXT5 2789 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 ITGB1BP1O14713 200 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 DHFRP00374 187 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 VAMP1P23763 118 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 LINC00205P59089 165 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 CBX3Q13185 183 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 Q3ZCU0 254 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 LY6G6FQ5SQ64 297 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 VMO1Q7Z5L0 202 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 ABHD12Q8N2K0 398 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 CIARTQ8N365 385 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 RTN4IP1Q8WWV3 396 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 METTL8Q9H825 291 aaKnown RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 SDHAF2Q9NX18 166 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 INSIG2Q9Y5U4 225 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 KPTNQ9Y664 436 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 ZFHX3Q15911 3703 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 CRYM-AS1A6NIL9 109 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 J3QR06 171 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 IL5P05113 134 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 CD34P28906 385 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 GPR12P47775 334 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 DVL1P1P54792 670 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 DHODHQ02127 395 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 EIF4EBP1Q13541 118 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 TMEM128Q5BJH2 165 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 TBC1D26Q86UD7 250 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 PDZD9Q8IXQ8 264 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 LYG1Q8N1E2 194 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 PNKDQ8N490 385 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
RIF1-202ENST00000414861 C1orf159Q96HA4 380 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 TBX15Q96SF7 602 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 PCGF1Q9BSM1 259 aa7.89□□□□□ -1.15
RIF1-202ENST00000414861 C9orf170A2RU37 121 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 PRAF2O60831 178 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 PGLYRP1O75594 196 aaPredicted RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 HOXB4P17483 251 aaPredicted RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 PRTN3P24158 256 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 RAB7AP51149 207 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 TAS2R31P59538 309 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 RND3P61587 244 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 SLC9A3R2Q15599 337 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 ZNF626Q68DY1 528 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 LPCAT3Q6P1A2 487 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 LYG2Q86SG7 212 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 DRAXINQ8NBI3 349 aaPredicted RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 OR9G1Q8NH87 305 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 ZNF596Q8TC21 504 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 RBMXL1Q96E39 390 aaKnown RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 DMRTB1Q96MA1 342 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 ZNF251Q9BRH9 671 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 CLEC7AQ9BXN2 247 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 OTOGQ6ZRI0 2925 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 TEX13DA0A0J9YY54 714 aaPredicted RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 hCG_1809904A0A1W2PP81 198 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PR64 198 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 A0A1W2PRV1 198 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 B4DSR2 109 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 RNASEK-C17orf49H0YIS7 233 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 MPPED1O15442 326 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 IGLV1-47P01700 117 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 OR5AC1P0C628 307 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 RPL30P62888 115 aaKnown RBP7.88□□□□□ -1.15
RIF1-202ENST00000414861 PAX8Q06710 450 aa7.88□□□□□ -1.15
RIF1-202ENST00000414861 DIAPH2-AS1Q14236 149 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms