RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 EXOC3-AS1Q8N2X6 119 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 SLC25A45Q8N413 288 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 KLHDC1Q8N7A1 406 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 NUP35Q8NFH5 326 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 OR10G6Q8NH81 332 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 C8orf46Q8TAG6 207 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 NEIL3Q8TAT5 605 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 MRPL24Q96A35 216 aaKnown RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 EEF1AKMT3Q96AZ1 226 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF419Q96HQ0 510 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 CIB3Q96Q77 187 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 EMC6Q9BV81 110 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 GGTLC1Q9BX51 225 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 TM2D1Q9BX74 207 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 MRPL32Q9BYC8 188 aaKnown RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 BANF2Q9H503 90 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 JPT2Q9H910 190 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 NRN1Q9NPD7 142 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 WRAP73Q9P2S5 460 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 RNF7Q9UBF6 113 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 PROCRQ9UNN8 238 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 POMPQ9Y244 141 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 KLF13Q9Y2Y9 288 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-203ENST00000414174 TRPM1Q7Z4N2 1603 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 PHLPP1O60346 1717 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 NEO1Q92859 1461 aa2.96□□□□□ -1.94
SF3B1-203ENST00000414174 MYH13Q9UKX3 1938 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CROCC2H7BZ55 1655 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 POLR2AP24928 1970 aaKnown RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 ABCA9Q8IUA7 1624 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 A0A0A6YYD4 124 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 TRAV26-2A0A0B4J265 109 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 SMIM35A0A1B0GVV1 85 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 NCBP2LA6PVI3 153 aaKnown RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF850A8MQ14 1090 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 K7EQS6 105 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 OVOL1O14753 267 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 MGST3O14880 152 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 GABARAPO95166 117 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 NCR2O95944 276 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CFDP00746 253 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 TNFP01375 233 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CPMP14384 443 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 LIFP15018 202 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CXCL2P19875 107 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 GPD1P21695 349 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 PSMB9P28065 219 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 TPPP2P59282 170 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 C1QTNF8P60827 252 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 BTG1P62324 171 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CX3CL1P78423 397 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CFHR3Q02985 330 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 SLC38A11Q08AI6 406 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 BATFQ16520 125 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 LRRC37A5PQ49AS3 106 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 TECRLQ5HYJ1 363 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 AMMECR1LQ6DCA0 310 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 HRCT1Q6UXD1 115 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 TMEM150AQ86TG1 271 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF429Q86V71 674 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 C9orf40Q8IXQ3 194 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF440Q8IYI8 595 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 RNF175Q8N4F7 328 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 OR2M3Q8NG83 312 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 OR8S1Q8NH09 359 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 NT5CQ8TCD5 201 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 CT55Q8WUE5 264 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 PSMF1Q92530 271 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 FRZBQ92765 325 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 MAGOHBQ96A72 148 aaKnown RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 C19orf24Q9BVV8 132 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 DPY30Q9C005 99 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 WDR61Q9GZS3 305 aaKnown RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 POMKQ9H5K3 350 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 UBE2TQ9NPD8 197 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 PARP11Q9NR21 331 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 KCNIP1Q9NZI2 227 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 MDFICQ9P1T7 246 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 LAMTOR3Q9UHA4 124 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 ZNF443Q9Y2A4 671 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 SIGLEC1Q9BZZ2 1709 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 EVPLQ92817 2033 aa2.95□□□□□ -1.94
SF3B1-203ENST00000414174 N4BP2Q86UW6 1770 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-203ENST00000414174 DENND4AQ7Z401 1863 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 A0A087WWV3 80 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 TRBV5-7A0A0A0MS05 114 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 A0A0D9SG52 128 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LOC107984640A0A0U1RRK4 108 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 C7orf71A4D174 169 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 C5orf63A6NC05 138 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 GGT3PA6NGU5 568 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 OR4C45A6NMZ5 311 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 RIIAD1A6NNX1 92 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CD300LBA8K4G0 201 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 B4DXG7 233 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 GGTLC3B5MD39 225 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 FNDC10F2Z333 226 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 BCL2L11O43521 198 aa2.94□□□□□ -1.94
SF3B1-203ENST00000414174 LMX1BO60663 402 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms