RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 KIR2DS1Q14954 304 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 ZNF124Q15973 351 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 MRGPRGQ86SM5 289 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 CXorf67Q86X51 503 aaPredicted RBP12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 DDA1Q9BW61 102 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 SF3B5Q9BWJ5 86 aaKnown RBP12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 SRD5A3Q9H8P0 318 aa12.33□□□□□ -0.44
SEMA3F-202ENST00000413852 TCAPO15273 167 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 CEACAM6P40199 344 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 FGFRL1Q8N441 504 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 SPSB4Q96A44 273 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 LURAP1Q96LR2 239 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 C12orf49Q9H741 205 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 CFIP05156 583 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 TPRX1Q8N7U7 411 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 ZNF114Q8NC26 417 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 LOC102723996A0A087X1L8 192 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 DEGS1O15121 323 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 GYPAP02724 150 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 SSTP61278 116 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 RPL30P62888 115 aaKnown RBP12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 FAM78BQ5VT40 261 aa12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
SEMA3F-202ENST00000413852 GRIFINA4D1Z8 144 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 ZG16O60844 167 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 IGHV3-13P01766 116 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 IGHV3-7P01780 117 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 FGF7P21781 194 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 PCBD1P61457 104 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 CST9LP1Q5W188 147 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 ABLIM2Q6H8Q1 611 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 FAM58AQ8N1B3 248 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 DRAM1Q8N682 238 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 SDSLQ96GA7 329 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 A6NNC1 897 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 SCGB1D1O95968 90 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 SRD5A2P31213 254 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 MPLP40238 635 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 LTC4SQ16873 150 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 FFAR4Q5NUL3 377 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 OR10G4Q8NGN3 311 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 OR10G9Q8NGN4 311 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 OR10G7Q8NGN6 311 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 SAP25Q8TEE9 199 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 C5orf30Q96GV9 206 aa12.31□□□□□ -0.44
SEMA3F-202ENST00000413852 RBMXL2O75526 392 aaKnown RBP12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 TGFBR3Q03167 851 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 GJE1A6NN92 205 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 DEFB108AA8MXU0 73 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 TOX3O15405 576 aaPredicted RBP12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 KBTBD11O94819 623 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 ATP5G3P48201 142 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 COLCA1Q6ZS62 124 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 SNHG12Q9BXW3 62 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 PRDM14Q9GZV8 571 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 FRMD6-AS1P0C7T7 363 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 MCEMP1Q8IX19 187 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 RAB24Q969Q5 203 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 ABHD14BQ96IU4 210 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 TMEM242Q9NWH2 141 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 TRIOBPQ9H2D6 2365 aa12.3□□□□□ -0.44
SEMA3F-202ENST00000413852 PAX5Q02548 391 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 OR52L2PQ8NGH6 319 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 IMMP2LQ96T52 175 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 OR51I2Q9H344 312 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 TMEM9BQ9NQ34 198 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 DVL1O14640 695 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 THBS3P49746 956 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 HBG1P69891 147 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 HBG2P69892 147 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 RNPS1Q15287 305 aaKnown RBP12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 Q8NFD4 153 aa12.29□□□□□ -0.44
SEMA3F-202ENST00000413852 DUXBA0A1W2PPF3 345 aa12.28□□□□□ -0.44
SEMA3F-202ENST00000413852 S1PR2O95136 353 aa12.28□□□□□ -0.44
SEMA3F-202ENST00000413852 OR2H2O95918 312 aa12.28□□□□□ -0.44
SEMA3F-202ENST00000413852 CELA3BP08861 270 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms