RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 WDR31Q8NA23 367 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 TIMP4Q99727 224 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 ECSCRQ19T08 205 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 LILRB1Q8NHL6 650 aaPredicted RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 CHCHD2Q9Y6H1 151 aaPredicted RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 DEDDO75618 318 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 RD3LP0DJH9 198 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 CALHM1Q8IU99 346 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 FAM222BQ8WU58 562 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 TMEM45BQ96B21 275 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 BRCA1P38398 1863 aaKnown RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 CORTO00230 105 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 SRSF10O75494 262 aaKnown RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 USF1P22415 310 aaPredicted RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 CCKARP32238 428 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 PMS2P11Q13670 270 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 VAMP3Q15836 100 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 LAIR2Q6ISS4 152 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 MMD2Q8IY49 270 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 MS4A7Q9GZW8 240 aaPredicted RBP13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
SH3BP4-203ENST00000409212 H3BQ15 152 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 GFRA3O60609 400 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 FAM87AP0C7U9 286 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 HIST1H1EP10412 219 aaKnown RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 SELENOTP62341 195 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 CRIPAKQ8N1N5 446 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TRAF4Q9BUZ4 470 aaPredicted RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 ELF5Q9UKW6 265 aaPredicted RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 RNF115Q9Y4L5 304 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 PIKFYVEQ9Y2I7 2098 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 J3QR89 54 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 AP4M1O00189 453 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TCAPO15273 167 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 HYPMO75409 117 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 P2RY4P51582 365 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 UBE2V2Q15819 145 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 NSUN5P2Q63ZY6 315 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 LYRM2Q9NU23 88 aaPredicted RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 WASHC3Q9Y3C0 194 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 ZNF253O75346 499 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 PTGDSP41222 190 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TCL1AP56279 114 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TMEM30BQ3MIR4 351 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 FAM209AQ5JX71 171 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TMEM14DPA8MWL7 114 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 PGLYRP1O75594 196 aaPredicted RBP13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 RECKO95980 971 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 TMEM204Q9BSN7 226 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 HIGD1AQ9Y241 93 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 Q6ZT83 130 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
SH3BP4-203ENST00000409212 FAM90A26D6RGX4 464 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 APELAP0DMC3 54 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 SULT1A2P50226 295 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 IDI2-AS1Q9NZ38 188 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 ZNHIT1O43257 154 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 ORM1P02763 201 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 THY1P04216 161 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 ZNF250P15622 560 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 OR5AC2Q9NZP5 309 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 UFC1Q9Y3C8 167 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 RPL8P62917 257 aaKnown RBP13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 TMEM183BQ1AE95 376 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 CXCL2P19875 107 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 FDCSPQ8NFU4 85 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 ZNF703Q9H7S9 590 aaPredicted RBP13.66□□□□□ -0.22
SH3BP4-203ENST00000409212 SYNGR3O43761 229 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 HOXA6P31267 233 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 PAXXQ9BUH6 204 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 PRR19A6NJB7 356 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 TXNDC17Q9BRA2 123 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 JPT1Q9UK76 154 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 CEACAM18A8MTB9 384 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 PXMP4Q9Y6I8 212 aa13.65□□□□□ -0.22
SH3BP4-203ENST00000409212 BCL2P10415 239 aa13.65□□□□□ -0.23
SH3BP4-203ENST00000409212 HLA-DRB5Q30154 266 aa13.65□□□□□ -0.23
SH3BP4-203ENST00000409212 CACNA1EQ15878 2313 aa13.65□□□□□ -0.23
SH3BP4-203ENST00000409212 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 SMPD2O60906 423 aa13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 COX6B1P14854 86 aa13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 OR10J1P30954 320 aa13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 ZNF658BQ4V348 819 aaPredicted RBP13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
SH3BP4-203ENST00000409212 IL22RA2Q969J5 263 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms