RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 ROM1Q03395 351 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 OR10S1Q8NGN2 331 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 OR10AC1Q8NH08 325 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
SHANK2-203ENST00000409161 SBK3P0C264 359 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 RTP5Q14D33 572 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 CD3EP07766 207 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM30BQ3MIR4 351 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-203ENST00000409161 PXMP4Q9Y6I8 212 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 MPLP40238 635 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 PATE1Q8WXA2 126 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
SHANK2-203ENST00000409161 GGTLC2Q14390 218 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM56-RWDD3S4R434 201 aa10.63□□□□□ -0.71
SHANK2-203ENST00000409161 OR2A4O95047 310 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 TRGC2P03986 189 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 COX7A1P24310 79 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 SLC6A13Q9NSD5 602 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 TREM2Q9NZC2 230 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 CEACAM18A8MTB9 384 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 AGAP20933 346 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 MC5RP33032 325 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 J3QT63 122 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF137PP52743 207 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 HES3Q5TGS1 186 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF793Q6ZN11 406 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ADAD2Q8NCV1 583 aaKnown RBP10.62□□□□□ -0.71
SHANK2-203ENST00000409161 AKIRIN1Q9H9L7 192 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-203ENST00000409161 IFNL4K9M1U5 179 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 SOCS7O14512 581 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ANKRD33Q7Z3H0 272 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF645Q8N7E2 425 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 AQP10Q96PS8 301 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 GLIPR1P48060 266 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 TEX30Q5JUR7 227 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM222Q9H0R3 208 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 LYZL2Q7Z4W2 148 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 IGHV3-43A0A0B4J1X8 118 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 IGHV3-43DP0DP04 118 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 PRDX2P32119 198 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 DLX6P56179 175 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 ROS1P08922 2347 aa10.62□□□□□ -0.71
SHANK2-203ENST00000409161 BRCA1P38398 1863 aaKnown RBP10.62□□□□□ -0.71
SHANK2-203ENST00000409161 A1L4Q6 167 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 LIPT2A6NK58 231 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM250H0YL14 139 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 FSTP19883 344 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 TSPOP30536 169 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 OTPQ5XKR4 325 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 OR4C45A6NMZ5 311 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 SLC25A17O43808 307 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF250P15622 560 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 ABHD3Q8WU67 409 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 VENTXO95231 258 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 ACER2Q5QJU3 275 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 LINC01465Q8N7H1 131 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 MRPL32Q9BYC8 188 aaKnown RBP10.61□□□□□ -0.71
SHANK2-203ENST00000409161 TRAV30A0A087WSZ9 112 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 C1QTNF12Q5T7M4 302 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 TSC2P49815 1807 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 LCTP09848 1927 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 A0A1B0GW15 77 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 NIT1Q86X76 327 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 PKIBQ9C010 78 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 RNF7Q9UBF6 113 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 PRSS2P07478 247 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 TMIGD3P0DMS9 266 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-203ENST00000409161 PSG2P11465 335 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 IRF3Q14653 427 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 RPS11P62280 158 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHANK2-203ENST00000409161 CCL7P80098 99 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 ZNF714Q96N38 554 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 GGACTQ9BVM4 153 aa10.61□□□□□ -0.71
SHANK2-203ENST00000409161 ADAMTSL3P82987 1691 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 SHISA7A6NL88 538 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 TMEM177Q53S58 311 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 WIPI1Q5MNZ9 446 aaPredicted RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 INO80CQ6PI98 192 aaPredicted RBP10.6□□□□□ -0.71
SHANK2-203ENST00000409161 MSRB3Q8IXL7 192 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 OR8G5Q8NG78 346 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 TRAV9-1A0A075B6T8 112 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A10PA6NDY2 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A18PA6NE21 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A16PA6NEW6 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A20PA6NIJ5 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A8PA6NJQ4 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A7PA6NKC0 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A22PA8MWA6 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A12PA8MX19 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A5PA8MXJ8 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 FAM90A23PA8MXZ1 464 aa10.6□□□□□ -0.71
SHANK2-203ENST00000409161 SOCS1O15524 211 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms