RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ABHD14BQ96IU4 210 aa3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 LURAP1Q96LR2 239 aa3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 NGBQ9NPG2 151 aa3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 ZDHHC8Q9ULC8 765 aa3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 POMT1Q9Y6A1 747 aa3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 DIDO1Q9BTC0 2240 aaKnown RBP3.32□□□□□ -1.88
LRRTM4-201ENST00000409088 A0A1B0GW55 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUXBA0A1W2PPF3 345 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 B8ZZF3 427 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 K7N7A8 449 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 WRBO00258 174 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 TAAR5O14804 337 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 SSSCA1O60232 199 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 IGKV1-39P01597 117 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 GYPAP02724 150 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 IGKV1D-39P04432 117 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L2P0CJ85 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L3P0CJ86 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L5P0CJ88 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L6P0CJ89 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L7P0CJ90 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 PVALBP20472 110 aaPredicted RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 GZMHP20718 246 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ASCL1P50553 236 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 LINC00205P59089 165 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 VAMP2P63027 116 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ZNF585BQ52M93 769 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4L9Q6RFH8 374 aaPredicted RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 BTNL3Q6UXE8 466 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 FAM90A1Q86YD7 464 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 LINC01560Q8TB33 94 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 NEUROG1Q92886 237 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 MISP3Q96FF7 219 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CCL13Q99616 98 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 REG4Q9BYZ8 158 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 GNG12Q9UBI6 72 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 DUX4Q9UBX2 424 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 PSG11Q9UQ72 335 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 MFSD2BA6NFX1 497 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 C17orf100A8MU93 164 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 C15orf65H3BRN8 121 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CHST1O43916 411 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 GPR137BO60478 399 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 JTBO76095 146 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CA7P43166 264 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 LPAR6P43657 344 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 P2RY1P47900 373 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 RPL30P62888 115 aaKnown RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 EIF5AP63241 154 aaKnown RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 TLE1Q04724 770 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ZNF816Q0VGE8 651 aaPredicted RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 LY6DQ14210 128 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 GPR157Q5UAW9 335 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 Q6ZRM9 215 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 OR2C3Q8N628 320 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ZNF645Q8N7E2 425 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 RNF141Q8WVD5 230 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 IL22RA2Q969J5 263 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 LIN7CQ9NUP9 197 aaKnown RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 TAS2R3Q9NYW6 316 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CACNG5Q9UF02 275 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 SESN1Q9Y6P5 492 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 RNF212BA8MTL3 300 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ZNF705EA8MWA4 302 aaPredicted RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 H3BP45 60 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 RAMP3O60896 148 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 KRASP01116 189 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 IGKV1-5P01602 117 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ADH4P08319 380 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 TNFRSF1AP19438 455 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CLINT1Q14677 625 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 Q3ZCU0 254 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 EIF5AL1Q6IS14 154 aaKnown RBP3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 SUN5Q8TC36 379 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 TCTEX1D2Q8WW35 142 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CCL17Q92583 94 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 C5orf30Q96GV9 206 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 CCDC140Q96MF4 163 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 WFDC1Q9HC57 220 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 MED9Q9NWA0 146 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 KALRNO60229 2985 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 ABCA4P78363 2273 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 USF3Q68DE3 2245 aa3.31□□□□□ -1.88
LRRTM4-201ENST00000409088 A0A1B0GU03 582 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 CLEC18AA5D8T8 446 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 C17orf98A8MV24 154 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 E7EQL1 145 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 CST7O76096 145 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 TMEM50AO95807 157 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 CLDN1O95832 211 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 PLAUP00749 431 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 PF4P02776 101 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 HTD2P86397 168 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 EWSR1Q01844 656 aaKnown RBP eCLIP3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 CATR1Q13166 79 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 TRAT1Q6PIZ9 186 aa3.3□□□□□ -1.88
LRRTM4-201ENST00000409088 SSX8Q7RTT4 187 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms