RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 DUSP15Q9H1R2 295 aaPredicted RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 HOXD4P09016 255 aaPredicted RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 NUBP1P53384 320 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 ANAPC1Q9H1A4 1944 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 A0A0B4J293 547 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 CTXND1A0A1B0GTU2 59 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 CKS2P33552 79 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 C1orf185Q5T7R7 199 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 MDP1Q86V88 176 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 SF3B6Q9Y3B4 125 aaKnown RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 HILPDAQ9Y5L2 63 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 VWA8A3KMH1 1905 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 PPIAL4EA0A075B759 164 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 PPIAL4DF5H284 164 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 J3QT63 122 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 CRHP06850 196 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 PPIAL4FP0DN26 164 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 KIAA0040Q15053 153 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
SMCR8-201ENST00000406438 PITPNC1Q9UKF7 332 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 PPIAL4AQ9Y536 164 aa10.52□□□□□ -0.73
SMCR8-201ENST00000406438 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 PAGE4O60829 102 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 ZNF137PP52743 207 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 NPVFQ9HCQ7 196 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 A8MWL6 223 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 S1PR2O95136 353 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 CDS2O95674 445 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 CA2P00918 260 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 CCL3P10147 92 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 TEX30Q5JUR7 227 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 RSG1Q9BU20 258 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 IGKV3D-15A0A087WSY6 115 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 IGHV3-21A0A0B4J1V1 117 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 IGKV3-15P01624 115 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 PRDX2P32119 198 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 LY75O60449 1722 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 RPL36A-HNRNPH2H7BZ11 118 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 COL9A1P20849 921 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 GVINP1Q7Z2Y8 2422 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 PPP1R17O96001 155 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 WDFY1Q8IWB7 410 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 ZNF645Q8N7E2 425 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 TMEM189A5PLL7 270 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 NKX2-6A6NCS4 301 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 GAPDHP04406 335 aaKnown RBP10.51□□□□□ -0.73
SMCR8-201ENST00000406438 MC5RP33032 325 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 PRR13Q9NZ81 148 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 PKIAP61925 76 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMCR8-201ENST00000406438 SIGLEC14Q08ET2 396 aa10.51□□□□□ -0.73
SMCR8-201ENST00000406438 MRPL13Q9BYD1 178 aaKnown RBP10.51□□□□□ -0.73
SMCR8-201ENST00000406438 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
SMCR8-201ENST00000406438 ERASQ7Z444 233 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 ADAMTS17Q8TE56 1095 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 CLDN14O95500 239 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 DMKNQ6E0U4 476 aaPredicted RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 ZFP36L2P47974 494 aaKnown RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 GAB4Q2WGN9 574 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 SMUG1Q53HV7 270 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 OR10AC1Q8NH08 325 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 UCN2Q96RP3 112 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 CDX2Q99626 313 aaPredicted RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 CDC42EP3Q9UKI2 254 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 HPRT1P00492 218 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 CCL4P13236 92 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 TFPI2P48307 235 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 SIGIRRQ6IA17 410 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 BVESQ8NE79 360 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 ISOC2Q96AB3 205 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 H3BQ15 152 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 ZNF658BQ4V348 819 aaPredicted RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 CHODLQ9H9P2 273 aa10.5□□□□□ -0.73
SMCR8-201ENST00000406438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
SMCR8-201ENST00000406438 TANC2Q9HCD6 1990 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 GLI3P10071 1580 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 LILRA6Q6PI73 481 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 LYZL2Q7Z4W2 148 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 MRPL30Q8TCC3 161 aaKnown RBP10.49□□□□□ -0.73
SMCR8-201ENST00000406438 A0A0U1RQV5 110 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 DIRC3C9JPN6 131 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 IFNL4K9M1U5 179 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 VN1R4Q7Z5H5 301 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 OR2V2Q96R30 315 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 DNAL4O96015 105 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 SPINK2P20155 84 aa10.49□□□□□ -0.73
SMCR8-201ENST00000406438 ZIC1Q15915 447 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms