RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	AQP12A	Q8IXF9	295 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HS3ST5	Q8IZT8	346 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461		Q8N6K4	173 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TCEANC	Q8N8B7	351 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR51T1	Q8NGJ9	327 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR13C3	Q8NGS6	347 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR13C9	Q8NGT0	318 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RFESD	Q8TAC1	157 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MRGPRD	Q8TDS7	321 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ST6GALNAC6	Q969X2	333 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RFT1	Q96AA3	541 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FGGY	Q96C11	551 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ADAT3	Q96EY9	351 aa	Predicted RBP	5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR4C12	Q96R67	309 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	S1PR3	Q99500	378 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LINC00574	Q9H8X3	128 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ARL2BP	Q9Y2Y0	163 aa		5.21	□□□□□ -1.58
CEACAM1-208	ENST00000403461	COL7A1	Q02388	2944 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TENM2	Q9NT68	2774 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGKV1-12	A0A0C4DH73	117 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461		A0A1W2PPE3	182 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TMEM30CP	A0ZSE6	113 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NPIPB11	E5RHQ5	1161 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LINC01619	G3V211	115 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SDCBP	O00560	298 aa	Predicted RBP	5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGKV1D-12	P01611	117 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MT-ND2	P03891	347 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ISG15	P05161	165 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HTR1F	P30939	366 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SSTR5	P35346	364 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	VEGFC	P49767	419 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RUNX1	Q01196	453 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MS4A2	Q01362	244 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	C2orf76	Q3KRA6	126 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461		Q6P435	159 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LYPD6	Q86Y78	171 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RDH10	Q8IZV5	341 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PRSS35	Q8N3Z0	413 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	STX19	Q8N4C7	294 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PRR26	Q8N8Z3	221 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	C8orf31	Q8N9H6	132 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR52M1	Q8NGK5	317 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR5D14	Q8NGL3	314 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CNIH3	Q8TBE1	160 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CANT1	Q8WVQ1	401 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	DCUN1D4	Q92564	292 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ARPC1A	Q92747	370 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SNAPC3	Q92966	411 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NRBF2	Q96F24	287 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MRPL48	Q96GC5	212 aa	Known RBP	5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR5B12	Q96R08	314 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NR1H4	Q96RI1	486 aa	Predicted RBP	5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IL4I1	Q96RQ9	567 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MBOAT4	Q96T53	435 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ATP6V0B	Q99437	205 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GPER1	Q99527	375 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TM2D3	Q9BRN9	247 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GNB4	Q9HAV0	340 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PARP11	Q9NR21	331 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	DNAH9	Q9NYC9	4486 aa		5.2	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TRAV41	A0A0B4J266	112 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF320	A2RRD8	509 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461		I3L521	148 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461		M0R129	80 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CASQ2	O14958	399 aa	Predicted RBP	5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ARPC1B	O15143	372 aa	Known RBP	5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CLEC3B	P05452	202 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	HTR1A	P08908	422 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CGB3	P0DN86	165 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CGB7	P0DN87	165 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	IGHV4-30-4	P0DP06	118 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CALB2	P22676	271 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CD40LG	P29965	261 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	KIR3DL2	P43630	455 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	GNB1	P62873	340 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PAX5	Q02548	391 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	CDK5R1	Q15078	307 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RSU1	Q15404	277 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MMD	Q15546	238 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TMEM30B	Q3MIR4	351 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461		Q3ZCU0	254 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TP53I3	Q53FA7	332 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	UTF1	Q5T230	341 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SSX6	Q7RTT6	188 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SPATA24	Q86W54	205 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FAM71E2	Q8N5Q1	922 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	LINC00311	Q8N616	119 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ZNF491	Q8N8L2	437 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	PXT1	Q8NFP0	134 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	OR2G2	Q8NGZ5	317 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	MYOZ3	Q8TDC0	251 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NEK7	Q8TDX7	302 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	TNFAIP8L1	Q8WVP5	186 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	ARL11	Q969Q4	196 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	FLYWCH2	Q96CP2	140 aa	Known RBP	5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	NSL1	Q96IY1	281 aa		5.19	□□□□□ -1.58
CEACAM1-208	ENST00000403461	SPACA5	Q96QH8	159 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms