RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 LINC00696Q6ZRV3 163 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 WDR61Q9GZS3 305 aaKnown RBP16.78■□□□□ 0.28
CCDC47-202ENST00000403162 OR1A1Q9P1Q5 309 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 MPC1Q9Y5U8 109 aa16.78■□□□□ 0.28
CCDC47-202ENST00000403162 ARR3P36575 388 aa16.77■□□□□ 0.28
CCDC47-202ENST00000403162 GPX4P36969 197 aaPredicted RBP16.77■□□□□ 0.28
CCDC47-202ENST00000403162 FGF8P55075 233 aaPredicted RBP16.77■□□□□ 0.28
CCDC47-202ENST00000403162 TESK1Q15569 626 aa16.77■□□□□ 0.28
CCDC47-202ENST00000403162 AGMATQ9BSE5 352 aa16.77■□□□□ 0.28
CCDC47-202ENST00000403162 PKIBQ9C010 78 aa16.77■□□□□ 0.28
CCDC47-202ENST00000403162 LIN7CQ9NUP9 197 aaKnown RBP16.77■□□□□ 0.28
CCDC47-202ENST00000403162 BOKQ9UMX3 212 aaPredicted RBP16.77■□□□□ 0.28
CCDC47-202ENST00000403162 MED13Q9UHV7 2174 aa16.77■□□□□ 0.28
CCDC47-202ENST00000403162 FREM1Q5H8C1 2179 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 ANKRD30BLA7E2S9 258 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 CCL11P51671 97 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 FOXG1P55316 489 aaPredicted RBP16.77■□□□□ 0.27
CCDC47-202ENST00000403162 PDZD11Q5EBL8 140 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 WDR25Q64LD2 544 aaPredicted RBP16.77■□□□□ 0.27
CCDC47-202ENST00000403162 MOB1BQ7L9L4 216 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 LILRB2Q8N423 598 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 CDH20Q9HBT6 801 aa16.77■□□□□ 0.27
CCDC47-202ENST00000403162 MAP1LC3B2A6NCE7 125 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 LHX2P50458 406 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 TUSC5Q8IXB3 177 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 IL1F10Q8WWZ1 152 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 MAP1LC3BQ9GZQ8 125 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 ZNF407Q9C0G0 2248 aa16.76■□□□□ 0.27
CCDC47-202ENST00000403162 CEBPZOSA8MTT3 80 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 FABP4P15090 132 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 ZNF585BQ52M93 769 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 C17orf78Q8N4C9 275 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 SSX3Q99909 188 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 PITPNC1Q9UKF7 332 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 APLNRP35414 380 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 SOX8P57073 446 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 Q6P435 159 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 OR4C12Q96R67 309 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 PLA2G3Q9NZ20 509 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 NAT8Q9UHE5 227 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 TIMM9Q9Y5J7 89 aa16.75■□□□□ 0.27
CCDC47-202ENST00000403162 FAM90A26D6RGX4 464 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 CLDN18P56856 261 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 TAF15Q92804 592 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC47-202ENST00000403162 OR51I2Q9H344 312 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 RBKSQ9H477 322 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 PPP1R3CQ9UQK1 317 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 LILRA1O75019 489 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 ZNF737O75373 536 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 PGA5P0DJD9 388 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 PLP2Q04941 152 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 SRYQ05066 204 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 SPINK14Q6IE38 97 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 CYP2G1PQ6ZSU1 146 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 SPACA3Q8IXA5 215 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 OR10A7Q8NGE5 316 aa16.74■□□□□ 0.27
CCDC47-202ENST00000403162 CHD3Q12873 2000 aaKnown RBP16.73■□□□□ 0.27
CCDC47-202ENST00000403162 NDUFS6O75380 124 aaKnown RBP16.73■□□□□ 0.27
CCDC47-202ENST00000403162 SYNGR4O95473 234 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 C4orf17Q53FE4 359 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 CENPVQ7Z7K6 275 aaPredicted RBP16.73■□□□□ 0.27
CCDC47-202ENST00000403162 PACRGQ96M98 296 aaPredicted RBP16.73■□□□□ 0.27
CCDC47-202ENST00000403162 HIST1H2BLQ99880 126 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 PYGO2Q9BRQ0 406 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 ZNF703Q9H7S9 590 aaPredicted RBP16.73■□□□□ 0.27
CCDC47-202ENST00000403162 SRD5A3Q9H8P0 318 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 DKK4Q9UBT3 224 aa16.73■□□□□ 0.27
CCDC47-202ENST00000403162 J3QT63 122 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 PKIAP61925 76 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 SLC38A11Q08AI6 406 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 GAMTQ14353 236 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 SPANXN5Q5MJ07 72 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 ZNF497Q6ZNH5 498 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 FDCSPQ8NFU4 85 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 S100PBPQ96BU1 408 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 FAM173AQ9BQD7 235 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 RHBDL1O75783 438 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 WNT5AP41221 380 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 OR1C1Q15619 314 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 NCR3LG1Q68D85 454 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 TMEM14EPQ6UXP3 125 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 OR2M7Q8NG81 312 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 OR5R1Q8NH85 324 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 C14orf144Q96I85 54 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 SNX22Q96L94 193 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 SMIM7Q9BQ49 75 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 SLC39A9Q9NUM3 307 aa16.72■□□□□ 0.27
CCDC47-202ENST00000403162 NEURL1O76050 574 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 PFN1P07737 140 aaKnown RBP16.71■□□□□ 0.27
CCDC47-202ENST00000403162 ELLP55199 621 aaPredicted RBP16.71■□□□□ 0.27
CCDC47-202ENST00000403162 MEF2BQ02080 365 aaPredicted RBP16.71■□□□□ 0.27
CCDC47-202ENST00000403162 TMEM183AQ8IXX5 376 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 LHX4Q969G2 390 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 APH1AQ96BI3 265 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 KCNS2Q9ULS6 477 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 UBE2L5PA0A1B0GUS4 154 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 KBTBD11O94819 623 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 IFNA10P01566 189 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 ESPL1Q14674 2120 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 TMEM241Q24JQ0 296 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms