RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 EWSR1Q01844 656 aaKnown RBP eCLIP12.59□□□□□ -0.398e-7■■■□□ 15
TNRC18-203ENST00000399537 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 DIRC2Q96SL1 478 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 FAM181BA6NEQ2 426 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 APOBEC4Q8WW27 367 aaKnown RBP12.59□□□□□ -0.39
TNRC18-203ENST00000399537 SF3B5Q9BWJ5 86 aaKnown RBP12.59□□□□□ -0.39
TNRC18-203ENST00000399537 GPR35Q9HC97 309 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 OVCH2Q7RTZ1 564 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 SPATA45Q537H7 98 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 LPAR2Q9HBW0 351 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 PNLIPP16233 465 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 COL10A1Q03692 680 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 RAB33BQ9H082 229 aa12.59□□□□□ -0.39
TNRC18-203ENST00000399537 CTDSPLO15194 276 aa12.58□□□□□ -0.39
TNRC18-203ENST00000399537 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.39
TNRC18-203ENST00000399537 PLA2G10O15496 165 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 COX6CP09669 75 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 KRTCAP3Q53RY4 240 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 TEX30Q5JUR7 227 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 UBE2V2Q15819 145 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 FAM209BQ5JX69 171 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 ADAMTS7Q9UKP4 1686 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 A0A1W2PPE3 182 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 MFAP2P55001 183 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 CARFQ8N187 725 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 RAXQ9Y2V3 346 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 MRAP2Q96G30 205 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 USF3Q68DE3 2245 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 BCL2P10415 239 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 C1QTNF12Q5T7M4 302 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 PCGF1Q9BSM1 259 aa12.58□□□□□ -0.4
TNRC18-203ENST00000399537 VN1R4Q7Z5H5 301 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 OR8G5Q8NG78 346 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 FLRT3Q9NZU0 649 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 LOC285556D6RIA3 1793 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 TRAV8-7A0A075B6U6 113 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 KBTBD11O94819 623 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 MAS1LP35410 378 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 SLC35B1P78383 322 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 CHST5Q9GZS9 411 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 CDX2Q99626 313 aaPredicted RBP12.57□□□□□ -0.4
TNRC18-203ENST00000399537 IL36RNQ9UBH0 155 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 OR4C45A6NMZ5 311 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 TNCP24821 2201 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 J3QT63 122 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 LMX1BO60663 402 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 J3QR06 171 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 TFPI2P48307 235 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 MDP1Q86V88 176 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 PRDM14Q9GZV8 571 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 TCF20Q9UGU0 1960 aaKnown RBP12.57□□□□□ -0.4
TNRC18-203ENST00000399537 RPL31P62899 125 aaKnown RBP12.57□□□□□ -0.4
TNRC18-203ENST00000399537 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 DCAF12L2Q5VW00 463 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 GFRA1P56159 465 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
TNRC18-203ENST00000399537 DSPPQ9NZW4 1301 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 ZNF98A6NK75 572 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 ATG4DQ86TL0 474 aaPredicted RBP12.56□□□□□ -0.4
TNRC18-203ENST00000399537 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 GZMHP20718 246 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 FAM3BP58499 235 aaPredicted RBP12.56□□□□□ -0.4
TNRC18-203ENST00000399537 ABHD14BQ96IU4 210 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 NRTNQ99748 197 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 MGAMO43451 1857 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 RAB29O14966 203 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 RHBDD2Q6NTF9 364 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 GPA33Q99795 319 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 IGHV1OR15-9A0A0B4J2B8 117 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 NXPH1P58417 271 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 LGALS3P17931 250 aaKnown RBP12.56□□□□□ -0.4
TNRC18-203ENST00000399537 MRPL30Q8TCC3 161 aaKnown RBP12.56□□□□□ -0.4
TNRC18-203ENST00000399537 ID4P47928 161 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 PLP1P60201 277 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
TNRC18-203ENST00000399537 CGB1A6NKQ9 187 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 RPL36A-HNRNPH2H7BZ11 118 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 TRAV39A0A0B4J263 110 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 OR4A5Q8NH83 315 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 UCN2Q96RP3 112 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 C1QL3Q5VWW1 255 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 GMPPAQ96IJ6 420 aaPredicted RBP12.55□□□□□ -0.4
TNRC18-203ENST00000399537 KLK13Q9UKR3 277 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 MRPS16Q9Y3D3 137 aaKnown RBP12.55□□□□□ -0.4
TNRC18-203ENST00000399537 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 HSPB7Q9UBY9 170 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 ELF5Q9UKW6 265 aaPredicted RBP12.55□□□□□ -0.4
TNRC18-203ENST00000399537 CCL21O00585 134 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms