RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PLAC9Q5JTB6 97 aa12.21□□□□□ -0.45
PCDHGA11-201ENST00000398587 OR10A7Q8NGE5 316 aa12.21□□□□□ -0.45
PCDHGA11-201ENST00000398587 A0A1W2PPE3 182 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 IGFBP3P17936 291 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 PTGDSP41222 190 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 LYPD8Q6UX82 237 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 DPPA3Q6W0C5 159 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR5P3Q8WZ94 311 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
PCDHGA11-201ENST00000398587 FAM157AC9JC47 383 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 TNFSF10P50591 281 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF645Q8N7E2 425 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 RHOVQ96L33 236 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 B4DEV8 164 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 MST1P26927 711 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 RTP5Q14D33 572 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 ASPHD2Q6ICH7 369 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 TEPPQ6URK8 271 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 LILRB1Q8NHL6 650 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF714Q96N38 554 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 H0Y8G0 127 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 GYPAP02724 150 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 LRRC3CA6NJW4 275 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 C9orf172C9J069 976 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 Q5BKY6 102 aa12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF552Q9H707 407 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA11-201ENST00000398587 ROS1P08922 2347 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 SERTM2A0A1B0GWG4 89 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 HSBP1O75506 76 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 DAOP14920 347 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF837Q96EG3 531 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR4P4Q8NGL7 312 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 C1QTNF5Q9BXJ0 243 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 CLCF1Q9UBD9 225 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 ARG1P05089 322 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 SPCS3P61009 180 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 LYZP61626 148 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 RUNX1Q01196 453 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 PSG5Q15238 335 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 ESPL1Q14674 2120 aa12.19□□□□□ -0.46
PCDHGA11-201ENST00000398587 PRR32B1ATL7 298 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 TOX4O94842 621 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 CEBPDP49716 269 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 ABLIM2Q6H8Q1 611 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 DOLPP1Q86YN1 238 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 GPR146Q96CH1 333 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 MESP1Q9BRJ9 268 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 IFNL4K9M1U5 179 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 HKR1P10072 659 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 NRIP2Q9BQI9 281 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 CALYQ9NYX4 217 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 CD8AP01732 235 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 CEACAM1P13688 526 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 CD1BP29016 333 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 ZNF596Q8TC21 504 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 FBLN5Q9UBX5 448 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 TUBD1Q9UJT1 453 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 PTPRDP23468 1912 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 NDUFA2O43678 99 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 PAGE4O60829 102 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 SLC24A4Q8NFF2 622 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
PCDHGA11-201ENST00000398587 ERVH48-1M5A8F1 160 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 TIMM23BQ5SRD1 257 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 NBASA2RRP1 2371 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 GLRXP35754 106 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 REG1BP48304 166 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 TMEM187Q14656 261 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 H3BQ15 152 aa12.17□□□□□ -0.46
PCDHGA11-201ENST00000398587 GNG7O60262 68 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms