RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
TTC28-201ENST00000397906 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 WNT9BO14905 357 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 ERGP11308 486 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 CLDN18P56856 261 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 Q6ZN92 141 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 SSBP3Q9BWW4 388 aaPredicted RBP9.78□□□□□ -0.84
TTC28-201ENST00000397906 HELTA6NFD8 242 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 ALX3O95076 343 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 LIPFP07098 398 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 APOBEC3AP31941 199 aaPredicted RBP9.78□□□□□ -0.84
TTC28-201ENST00000397906 MOGAT2Q3SYC2 334 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 KLHDC1Q8N7A1 406 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 WDFY2Q96P53 400 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 IDI2-AS1Q9NZ38 188 aa9.78□□□□□ -0.84
TTC28-201ENST00000397906 PHOX2AO14813 284 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 PTX4Q96A99 478 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 IGHV3OR16-13A0A075B7E8 117 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 IGHV3-74A0A0B4J1X5 117 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 FUT5Q11128 374 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 ZNF561Q8N587 486 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 ELOVL5Q9NYP7 299 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 BRWD1Q9NSI6 2320 aa9.77□□□□□ -0.84
TTC28-201ENST00000397906 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 B9A039 149 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 VSIG10L2P0DP72 767 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 MMP16P51512 607 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 AMMECR1LQ6DCA0 310 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 PCSK4Q6UW60 755 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 A0A1W2PR77 199 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 NGFRP08138 427 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 CXorf66Q5JRM2 361 aaPredicted RBP9.77□□□□□ -0.85
TTC28-201ENST00000397906 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 A0A1W2PS18 150 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 RECKO95980 971 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 CLEC7AQ9BXN2 247 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 CYB5R1Q9UHQ9 305 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 OTOFQ9HC10 1997 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 PTP4A3O75365 173 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 KIR2DL2P43627 348 aaPredicted RBP9.77□□□□□ -0.85
TTC28-201ENST00000397906 SNX22Q96L94 193 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 S4R3C0 116 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 RIGQ13278 110 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 ZNF880Q6PDB4 577 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 DHRS11Q6UWP2 260 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 ANGPTL6Q8NI99 470 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 RGP1Q92546 391 aaPredicted RBP9.77□□□□□ -0.85
TTC28-201ENST00000397906 AMELYQ99218 206 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 ZNRF1Q8ND25 227 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 CXorf1O96002 111 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 MC5RP33032 325 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 LRRC75BQ2VPJ9 315 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 FAM201AQ5SY85 155 aa9.77□□□□□ -0.85
TTC28-201ENST00000397906 HYPMO75409 117 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 DEDDO75618 318 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 ST6GALNAC2Q9UJ37 374 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 TGOLN2O43493 480 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 TGFAP01135 160 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 ZIC3O60481 467 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 RCC1P18754 421 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 PEAR1Q5VY43 1037 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 Q6ZT83 130 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 CLDN34H7C241 214 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 CA11O75493 328 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 MBPP02686 304 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 GLIPR1P48060 266 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 PSME4Q14997 1843 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 FOXH1O75593 365 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 ZNF735P0CB33 412 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 SLC35E3Q7Z769 313 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 WFDC6Q9BQY6 131 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 EIF4EBP2Q13542 120 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 HSD17B13Q7Z5P4 300 aaPredicted RBP9.76□□□□□ -0.85
TTC28-201ENST00000397906 ZBTB34Q8NCN2 500 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 RAX2Q96IS3 184 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
TTC28-201ENST00000397906 H3BTX0 84 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 RGS13O14921 159 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 LRP11Q86VZ4 500 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 OR10C1Q96KK4 312 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 ZNF703Q9H7S9 590 aaPredicted RBP9.75□□□□□ -0.85
TTC28-201ENST00000397906 OR4C46A6NHA9 309 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 NDUFA2O43678 99 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 ADAM11O75078 769 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 SMUG1Q53HV7 270 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 NAT8Q9UHE5 227 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 LHFPL6Q9Y693 200 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 SSTR5P35346 364 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 OR52M1Q8NGK5 317 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 PXMP4Q9Y6I8 212 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 DUXBA0A1W2PPF3 345 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 ODAMA1E959 279 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 PTBP3O95758 552 aaKnown RBP9.75□□□□□ -0.85
TTC28-201ENST00000397906 CALHM1Q8IU99 346 aa9.75□□□□□ -0.85
TTC28-201ENST00000397906 HIST1H1BP16401 226 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms