RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SH2D2AQ9NP31 389 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF391Q9UJN7 358 aa13.61□□□□□ -0.23
CHMP1A-201ENST00000397901 UBE2NP61088 152 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 PRSS8Q16651 343 aa13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 LCN15Q6UWW0 184 aa13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 LRP11Q86VZ4 500 aa13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
CHMP1A-201ENST00000397901 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 KBTBD11O94819 623 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 RFPL3SP0C7P2 107 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 VDAC1P21796 283 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 GPM6AP51674 278 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 ID3Q02535 119 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 IL11RAQ14626 422 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 CLEC12BQ2HXU8 276 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 C9orf135Q5VTT2 229 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 VAMP8Q9BV40 100 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 ZNF407Q9C0G0 2248 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 A8MXE2 369 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 NTN3O00634 580 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 KLF7O75840 302 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 IFNA5P01569 189 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 CCL2P13500 99 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 IZUMO4Q1ZYL8 232 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 SLC25A24Q6NUK1 477 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 TMEM256Q8N2U0 113 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 OR10D3Q8NH80 312 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 ABHD3Q8WU67 409 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 TECTBQ96PL2 329 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 FGF23Q9GZV9 251 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 PLK3Q9H4B4 646 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 RPRMQ9NS64 109 aa13.59□□□□□ -0.23
CHMP1A-201ENST00000397901 IGKV1-6A0A0C4DH72 117 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 A0A0G2JRQ6 117 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 A0A1W2PN81 502 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 CCL25O15444 150 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 UCP1P25874 307 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 CHRNA7P36544 502 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 PAX9P55771 341 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 PCBD1P61457 104 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 ACSF3Q4G176 576 aaPredicted RBP13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 WIPI1Q5MNZ9 446 aaPredicted RBP13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 TAAR3PQ9P1P4 343 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 RNF150Q9ULK6 438 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 PAM16Q9Y3D7 125 aa13.58□□□□□ -0.23
CHMP1A-201ENST00000397901 LAMTOR5O43504 91 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 NAPSAO96009 420 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 HLA-HP01893 362 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 MLF1P58340 268 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 LCN2P80188 198 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 TDRG1Q3Y452 100 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 KCNIP4Q6PIL6 250 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 CHD3Q12873 2000 aaKnown RBP13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 NCKAP5O14513 1909 aa13.58□□□□□ -0.24
CHMP1A-201ENST00000397901 LRRC3CA6NJW4 275 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 LILRA1O75019 489 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 NXPH2O95156 264 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 CCL4P13236 92 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 FGF8P55075 233 aaPredicted RBP13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 OR51H1Q8NH63 302 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 A0A096LPE4 126 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 A0A1W2PPZ6 126 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 DNPH1O43598 174 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 SRD5A2P31213 254 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 ZXDAP98168 799 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 RSG1Q9BU20 258 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 RNF115Q9Y4L5 304 aa13.57□□□□□ -0.24
CHMP1A-201ENST00000397901 CLEC18AA5D8T8 446 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 NUPR1O60356 82 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 P04436 131 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 TPPP2P59282 170 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 RPL15P61313 204 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 ATP6V1FQ16864 119 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM180AQ6UWF9 173 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 CLEC18CQ8NCF0 446 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 CMTM2Q8TAZ6 248 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 BTF3L4Q96K17 158 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 CIB3Q96Q77 187 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 C1QTNF5Q9BXJ0 243 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 TRAPPC1Q9Y5R8 145 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 TRAV39A0A0B4J263 110 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 PGLYRP1O75594 196 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 TUSC2O75896 110 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 CLDN15P56746 228 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 FGF12P61328 243 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 RTP5Q14D33 572 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 Q6ZS49 121 aa13.56□□□□□ -0.24
CHMP1A-201ENST00000397901 OR5D13Q8NGL4 314 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms