RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CXorf67Q86X51 503 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST3H2BBQ8N257 126 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RAB24Q969Q5 203 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 GPR146Q96CH1 333 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 SLC25A31Q9H0C2 315 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 STRAPQ9Y3F4 350 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RBM7Q9Y580 266 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OR5H1A6NKK0 313 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 AGFG2O95081 481 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 GNG10P50151 68 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 UCP2P55851 309 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CD81P60033 236 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ERVK11-1P61568 191 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RUNX1Q01196 453 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 TESK1Q15569 626 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF610Q8N9Z0 462 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 NDUFAF3Q9BU61 184 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OR14J1Q9UGF5 321 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OTOGLQ3ZCN5 2332 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 S100GP29377 79 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 MPV17P39210 176 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PAX9P55771 341 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 Q6ZRM9 215 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CLCF1Q9UBD9 225 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 UMAD1C9J7I0 102 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF16P17020 682 aaPredicted RBP15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RPS23P62266 143 aaKnown RBP15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF497Q6ZNH5 498 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 FAM214BQ7L5A3 538 aa15.5■□□□□ 0.07
CHRFAM7A-202ENST00000397827 GABRA6Q16445 453 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IL22RA2Q969J5 263 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 KCNS2Q9ULS6 477 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 POLDIP2Q9Y2S7 368 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 SPAARA0A1B0GVQ0 90 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BKO60814 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IGKV1-39P01597 117 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IGKV1D-39P04432 117 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BJP06899 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PGA5P0DJD9 388 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 WT1P19544 449 aaPredicted RBP15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BOP23527 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 LMO1P25800 156 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IL2RGP31785 369 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BBP33778 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BDP58876 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BCP62807 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CCL20P78556 96 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RHEBQ15382 184 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST2H2BEQ16778 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 COMMD1Q8N668 190 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 DEFB124Q8NES8 71 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BHQ93079 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BNQ99877 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 HIST1H2BMQ99879 126 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RARRES2Q99969 163 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 GOLT1BQ9Y3E0 138 aa15.49■□□□□ 0.07
CHRFAM7A-202ENST00000397827 WDR1O75083 606 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 VWA1Q6PCB0 445 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF826PQ6ZT77 177 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ABHD14BQ96IU4 210 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 MAS1LP35410 378 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 KLF14Q8TD94 323 aaPredicted RBP15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OBP2BQ9NPH6 170 aa15.48■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 OR13C7P0DN81 318 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 RAC2P15153 192 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 MDH2P40926 338 aaKnown RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CD200P41217 278 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 NKX6-1P78426 367 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 AKR1C8PQ5T2L2 129 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 Q6ZT83 130 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 Q8IYB0 196 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF295-AS1Q8N0V1 137 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 FZR1Q9UM11 496 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 WNT9BO14905 357 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PSPNO60542 156 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 TFF1P04155 84 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 TMEM267Q0VDI3 215 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 COTL1Q14019 142 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF664Q8N3J9 261 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 PACRGQ96M98 296 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CACNG5Q9UF02 275 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 KIAA1324LA8MWY0 1029 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IQCF6A8MYZ5 107 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 J3QW42 95 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 SH2D1BO14796 132 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 ZNF146Q15072 292 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 FAM53AQ6NSI3 398 aaPredicted RBP15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 YPEL4Q96NS1 127 aa15.47■□□□□ 0.07
CHRFAM7A-202ENST00000397827 CNOT4O95628 575 aaKnown RBP15.46■□□□□ 0.07
CHRFAM7A-202ENST00000397827 IGHG3P01860 377 aa15.46■□□□□ 0.07
CHRFAM7A-202ENST00000397827 C9orf106Q8NAJ2 232 aa15.46■□□□□ 0.07
CHRFAM7A-202ENST00000397827 INTS1Q8N201 2190 aaKnown RBP15.46■□□□□ 0.07
CHRFAM7A-202ENST00000397827 NPIPB11E5RHQ5 1161 aa15.46■□□□□ 0.06
CHRFAM7A-202ENST00000397827 MLNRO43193 412 aa15.46■□□□□ 0.06
CHRFAM7A-202ENST00000397827 BAXQ07812 192 aa15.46■□□□□ 0.06
CHRFAM7A-202ENST00000397827 BEND2Q8NDZ0 799 aa15.46■□□□□ 0.06
CHRFAM7A-202ENST00000397827 NOL4LQ96MY1 436 aaPredicted RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms