RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CXCL12P48061 93 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SAPCD1Q5SSQ6 148 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 OR5R1Q8NH85 324 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 P2RX4Q99571 388 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM222Q9H0R3 208 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SEBOXQ9HB31 216 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 ERRFI1Q9UJM3 462 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TDRD6O60522 2096 aaKnown RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 IFITM10A6NMD0 228 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SYNGR2O43760 224 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 IGHV2-5P01817 119 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 GRPP07492 148 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A6P0DMU7 189 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A5P0DMU8 189 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A7P0DMV0 189 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 EN2P19622 333 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SPINK2P20155 84 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 EPHA8P29322 1005 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TNFSF10P50591 281 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A1Q5HYN5 189 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 COA6Q5JTJ3 125 aaKnown RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 S100A7AQ86SG5 101 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CISD2Q8N5K1 135 aaKnown RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A3Q8NHU0 189 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM54Q969K7 222 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM45BQ96B21 275 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CLDN23Q96B33 292 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 NCOA6Q14686 2063 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 MARCH11A6NNE9 402 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 APCSP02743 223 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CTSBP07858 339 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 B4GALT1P15291 398 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 WNT5AP41221 380 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 DSCR4P56555 118 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HLA-BQ31612 363 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SGMS2Q8NHU3 365 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 LINC00470Q9BZP3 86 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CISD1Q9NZ45 108 aaKnown RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF835Q9Y2P0 537 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TRBV24-1A0A075B6N3 115 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 IGKV3D-15A0A087WSY6 115 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 A6NDN8 102 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 LRRC3CA6NJW4 275 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 EREGO14944 169 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SPINT2O43291 252 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HPRT1P00492 218 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 DEFB123Q8N688 67 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 PPP1R35Q8TAP8 253 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 NABP1Q96AH0 204 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 PARLQ9H300 379 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 SRD5A3Q9H8P0 318 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 CCL28Q9NRJ3 127 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BKO60814 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BJP06899 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TNFSF4P23510 183 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BOP23527 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BBP33778 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BDP58876 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BCP62807 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST2H2BEQ16778 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 PYY3Q5JQD4 70 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 PET117Q6UWS5 81 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 BPIFA4PQ86YQ2 179 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 H1FOOQ8IZA3 346 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BHQ93079 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BNQ99877 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H2BMQ99879 126 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 RSG1Q9BU20 258 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 USF3Q68DE3 2245 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 IRF2P14316 349 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 MPLP40238 635 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 ARG2P78540 354 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM249Q2WGJ8 235 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF506Q5JVG8 444 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 PTCRAQ6ISU1 281 aaPredicted RBP4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TRAT1Q6PIZ9 186 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 VHLLQ6RSH7 139 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 OR52M1Q8NGK5 317 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 OR5D13Q8NGL4 314 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 TRIB1Q96RU8 372 aa4.7□□□□□ -1.66
PTPRD-205ENST00000397611 OR5B21A6NL26 309 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TFPI2P48307 235 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SLC35B1P78383 322 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 HGFACQ04756 655 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 ARL16Q0P5N6 197 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SFTPA2Q8IWL1 248 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 ZBTB34Q8NCN2 500 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 OR10V1Q8NGI7 309 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 OR2Y1Q8NGV0 311 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 BCL2L2Q92843 193 aaPredicted RBP4.69□□□□□ -1.66
PTPRD-205ENST00000397611 SLC35E1Q96K37 410 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF576Q9H609 170 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1W2PP11 408 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM187Q14656 261 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 AGBL5Q8NDL9 886 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 IL19Q9UHD0 177 aa4.69□□□□□ -1.66
PTPRD-205ENST00000397611 IGKV1D-43A0A0B4J1Z2 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms