RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 SEBOXQ9HB31 216 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 ZFP57Q9NU63 452 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 NKX6-3A6NJ46 265 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 H0Y980 276 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 K7EPK0 472 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 CDS2O95674 445 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 TFF1P04155 84 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 SLC35E4Q6ICL7 350 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 CD177Q8N6Q3 437 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 C10orf105Q8TEF2 133 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
CAPN3-207ENST00000397200 SDHAF2Q9NX18 166 aa12.36□□□□□ -0.43
CAPN3-207ENST00000397200 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 TAAR5O14804 337 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 NDUFA2O43678 99 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-207ENST00000397200 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM155Q4W5P6 130 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 HSD17B13Q7Z5P4 300 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-207ENST00000397200 BPESC1Q9GZL8 116 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 TOLLIPQ9H0E2 274 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 DNTTIP1Q9H147 329 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF665Q9H7R5 613 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
CAPN3-207ENST00000397200 BAHCC1Q9P281 2608 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 A0A1B0GW55 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 SHOXO15266 292 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 FGF16O43320 207 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 PSPNO60542 156 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 FGF2P09038 288 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L2P0CJ85 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L3P0CJ86 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L4P0CJ87 422 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L5P0CJ88 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L6P0CJ89 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4L7P0CJ90 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 COL10A1Q03692 680 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 CLEC12BQ2HXU8 276 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM268Q5VZI3 342 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 BAP18Q8IXM2 172 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
CAPN3-207ENST00000397200 OR5D13Q8NGL4 314 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 SDSLQ96GA7 329 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 ABHD14BQ96IU4 210 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 CCL13Q99616 98 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 DUX4Q9UBX2 424 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 METRNQ9UJH8 293 aa12.34□□□□□ -0.43
CAPN3-207ENST00000397200 PIGBOS1A0A0B4J2F0 54 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 A8MXK9 166 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 E5RGE8 158 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 I3L521 148 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 TMPRSS2O15393 492 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 ADAM20O43506 726 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 PGLYRP1O75594 196 aaPredicted RBP12.33□□□□□ -0.43
CAPN3-207ENST00000397200 IGLV2-14P01704 120 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 HEXAP06865 529 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 NMSQ5H8A3 153 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 Q5PR19 223 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 FAM74A1Q5RGS3 127 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF788Q6ZQV5 615 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 FAM219AQ8IW50 185 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF561Q8N587 486 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 OR10V1Q8NGI7 309 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 AKR1E2Q96JD6 320 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 GAFA1Q96PS6 74 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 SPIN2AQ99865 258 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 NARFLQ9H6Q4 476 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 TRAPPC2LQ9UL33 140 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 NSG2Q9Y328 171 aa12.33□□□□□ -0.43
CAPN3-207ENST00000397200 ITPR2Q14571 2701 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 CSMD2Q7Z408 3487 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 HSD17B6O14756 317 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-207ENST00000397200 SIGLEC5O15389 551 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
CAPN3-207ENST00000397200 F2RP25116 425 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 RPL12P30050 165 aaKnown RBP12.33□□□□□ -0.44
CAPN3-207ENST00000397200 OR3A1P47881 315 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 THOC7Q6I9Y2 204 aaKnown RBP12.33□□□□□ -0.44
CAPN3-207ENST00000397200 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 FAM216BQ8N7L0 139 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 OR52M1Q8NGK5 317 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 COQ2Q96H96 371 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 KAAG1Q9UBP8 84 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 MIOXQ9UGB7 285 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 UBE2J1Q9Y385 318 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms