RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 CD55P08174 381 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 RPL23P62829 140 aaKnown RBP11.28□□□□□ -0.6
TRIM40-207ENST00000396581 COL10A1Q03692 680 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 TESK1Q15569 626 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 Q3ZCU0 254 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
TRIM40-207ENST00000396581 RPP25LQ8N5L8 163 aaKnown RBP11.28□□□□□ -0.6
TRIM40-207ENST00000396581 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 ABHD3Q8WU67 409 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
TRIM40-207ENST00000396581 ACY3Q96HD9 319 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
TRIM40-207ENST00000396581 OR4C12Q96R67 309 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 PRSS50Q9UI38 385 aa11.28□□□□□ -0.6
TRIM40-207ENST00000396581 PCSK5Q92824 1860 aa11.27□□□□□ -0.6
TRIM40-207ENST00000396581 DOCK10Q96BY6 2186 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 IAPPP10997 89 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 FOSL1P15407 271 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 APLNRP35414 380 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 BSXQ3C1V8 233 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 RNASE11Q8TAA1 199 aaKnown RBP11.27□□□□□ -0.61
TRIM40-207ENST00000396581 TMEM170AQ8WVE7 144 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 PRO1933Q9H354 126 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF552Q9H707 407 aaPredicted RBP11.27□□□□□ -0.61
TRIM40-207ENST00000396581 DLL3Q9NYJ7 618 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 DMXL1Q9Y485 3027 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 NCKAP5O14513 1909 aa11.27□□□□□ -0.61
TRIM40-207ENST00000396581 GCGP01275 180 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 RNF224P0DH78 156 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 GZMHP20718 246 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 CD82P27701 267 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
TRIM40-207ENST00000396581 ARF1P84077 181 aaKnown RBP11.26□□□□□ -0.61
TRIM40-207ENST00000396581 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
TRIM40-207ENST00000396581 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 PRRG4Q9BZD6 226 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 IL17BQ9UHF5 180 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 TYMSP04818 313 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 DCAF10Q5QP82 559 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 LHX4Q969G2 390 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 NDUFAF3Q9BU61 184 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 PKIBQ9C010 78 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 SLC39A9Q9NUM3 307 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 LIN7CQ9NUP9 197 aaKnown RBP11.26□□□□□ -0.61
TRIM40-207ENST00000396581 OR1A1Q9P1Q5 309 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 TP53TG5Q9Y2B4 290 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 FAM186AA6NE01 2351 aa11.26□□□□□ -0.61
TRIM40-207ENST00000396581 C5orf49A4QMS7 147 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 OR5B21A6NL26 309 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 GGCTO75223 188 aaKnown RBP11.25□□□□□ -0.61
TRIM40-207ENST00000396581 SELLP14151 372 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 MDKP21741 143 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-207ENST00000396581 GALR1P47211 349 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 ADIRFQ15847 76 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 Q6P435 159 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 BEND4Q6ZU67 534 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF573Q86YE8 665 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 C17orf78Q8N4C9 275 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 RDH5Q92781 318 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 THOC3Q96J01 351 aaKnown RBP11.25□□□□□ -0.61
TRIM40-207ENST00000396581 POM121L2Q96KW2 1035 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-207ENST00000396581 MPC1Q9Y5U8 109 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 CEP250Q9BV73 2442 aa11.25□□□□□ -0.61
TRIM40-207ENST00000396581 PTPRZ1P23471 2315 aaPredicted RBP11.25□□□□□ -0.61
TRIM40-207ENST00000396581 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 PPP5D1E7EU14 171 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 TM4SF5O14894 197 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 MRPL33O75394 65 aaKnown RBP11.24□□□□□ -0.61
TRIM40-207ENST00000396581 IL18BPO95998 194 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 HRASP01112 189 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 CYB561P49447 251 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 ATP6V1FQ16864 119 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
TRIM40-207ENST00000396581 PARLQ9H300 379 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 GAB2Q9UQC2 676 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 CELSR3Q9NYQ7 3312 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 XKRY2A2RUG3 117 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 H7BYZ3 331 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 HS3ST1O14792 307 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 P0C879 139 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 NDUFB7P17568 137 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
TRIM40-207ENST00000396581 SPANXN5Q5MJ07 72 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 ACSM6Q6P461 480 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms