RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 OR10G9Q8NGN4 311 aa7.36□□□□□ -1.23
BDNF-204ENST00000395980 OR10G7Q8NGN6 311 aa7.36□□□□□ -1.23
BDNF-204ENST00000395980 SLC25A22Q9H936 323 aa7.36□□□□□ -1.23
BDNF-204ENST00000395980 REV3LO60673 3130 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 ANKRD30BLA7E2S9 258 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 EREGO14944 169 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 MRPL33O75394 65 aaKnown RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 SYNGR4O95473 234 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 CLDN1O95832 211 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 IGHEP01854 428 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 P0C879 139 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 C1orf194Q5T5A4 169 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 Q6P435 159 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 TMEM37Q8WXS4 190 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 ZNF552Q9H707 407 aaPredicted RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 PPP1R3CQ9UQK1 317 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 A0A0G2JMM0 328 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 A0A1W2PPB8 328 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 A0A1W2PRS3 328 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 C5orf49A4QMS7 147 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 KIR3DP1A8MWS1 328 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 J3QT63 122 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 HS3ST1O14792 307 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 ARR3P36575 388 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 TMEM144Q7Z5S9 345 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 ABHD3Q8WU67 409 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 DIRC2Q96SL1 478 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 WASF3Q9UPY6 502 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 TMEM210A6NLX4 147 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 M0R143 59 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 PDE6DO43924 150 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 RPL15P61313 204 aaKnown RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 FIP1L1Q6UN15 594 aaKnown RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 FAM180AQ6UWF9 173 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 ZNF497Q6ZNH5 498 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 FGFRL1Q8N441 504 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 SPEM1Q8N4L4 309 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 IL1F10Q8WWZ1 152 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 CIB3Q96Q77 187 aaPredicted RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
BDNF-204ENST00000395980 KCNS2Q9ULS6 477 aa7.35□□□□□ -1.23
BDNF-204ENST00000395980 PMS2P5A8MQ11 134 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
BDNF-204ENST00000395980 GFRA1P56159 465 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 PPP1CBP62140 327 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 FOXL1Q12952 345 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 RTP5Q14D33 572 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
BDNF-204ENST00000395980 FFAR4Q5NUL3 377 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 OR8G2PQ6IF36 304 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 Q8IYB0 196 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 DRAM1Q8N682 238 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 TCTEX1D1Q8N7M0 179 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 OR1K1Q8NGR3 316 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 TXNDC17Q9BRA2 123 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 PPP1R14DQ9NXH3 145 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 FKBP11Q9NYL4 201 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 RBM7Q9Y580 266 aaKnown RBP7.34□□□□□ -1.23
BDNF-204ENST00000395980 C17orf112F2Z3M2 114 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 RAB4AP20338 218 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 IL3RAP26951 378 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 SAP25Q8TEE9 199 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 R3HDM4Q96D70 268 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 POM121L2Q96KW2 1035 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 TMEM68Q96MH6 324 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 WIPI2Q9Y4P8 454 aa7.34□□□□□ -1.23
BDNF-204ENST00000395980 F6UZH7 168 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 M0QZK8 103 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 CCNOP22674 350 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 OR10J1P30954 320 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 FOLR3P41439 243 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 TRA2AQ13595 282 aaKnown RBP eCLIP7.34□□□□□ -1.24
BDNF-204ENST00000395980 BTNL3Q6UXE8 466 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 ZNF709Q8N972 641 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 RAB1CQ92928 201 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 WDYHV1Q96HA8 205 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.34□□□□□ -1.24
BDNF-204ENST00000395980 PXMP4Q9Y6I8 212 aa7.34□□□□□ -1.24
BDNF-204ENST00000395980 CACNA1EQ15878 2313 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 OR4A8P0C604 315 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 RFPL3SP0C7P2 107 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
BDNF-204ENST00000395980 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 LINC01551Q86U37 167 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 ZNF488Q96MN9 340 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 PHF7Q9BWX1 381 aaPredicted RBP7.33□□□□□ -1.24
BDNF-204ENST00000395980 NPCDR1Q9BY65 106 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 NCKAP5O14513 1909 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 LRRC30A6NM36 301 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 PAGE4O60829 102 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 WDR1O75083 606 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 UBE2NP61088 152 aaKnown RBP7.33□□□□□ -1.24
BDNF-204ENST00000395980 GNB2P62879 340 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 PRRG4Q9BZD6 226 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 KCNIP2Q9NS61 270 aa7.33□□□□□ -1.24
BDNF-204ENST00000395980 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms