RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 FAM90A14PP0C7W9 464 aa13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 FAM90A24PP0C7X0 464 aa13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 MRPL21Q7Z2W9 205 aaKnown RBP13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 CISD2Q8N5K1 135 aaKnown RBP13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 ANAPC16Q96DE5 110 aa13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 TBX15Q96SF7 602 aa13.93□□□□□ -0.18
EFEMP1-202ENST00000394555 MBP02144 154 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 SLC25A6P12236 298 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 IL3RAP26951 378 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 UBE2G2P60604 165 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 BATFQ16520 125 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 FFAR4Q5NUL3 377 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 ABHD3Q8WU67 409 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 OR51B6Q9H340 312 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 GPR35Q9HC97 309 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 DCAF16Q9NXF7 216 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 GCH1P30793 250 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 LTBRP36941 435 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 PCOLCEQ15113 449 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 KRTAP27-1Q3LI81 207 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 C1orf194Q5T5A4 169 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 GUSBP11Q6P575 273 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 SF3B5Q9BWJ5 86 aaKnown RBP13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 TMEM9BQ9NQ34 198 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 R4GN57 208 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 CACNA1DQ01668 2161 aa13.92□□□□□ -0.18
EFEMP1-202ENST00000394555 A0A0G2JMM0 328 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 A0A1W2PPB8 328 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 A0A1W2PRS3 328 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 PGPEP1LA6NFU8 196 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 KIR3DP1A8MWS1 328 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 ZNF585BQ52M93 769 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 TCF23Q7RTU1 214 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 CENPVQ7Z7K6 275 aaPredicted RBP13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 ZNF716A6NP11 495 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 LILRA1O75019 489 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 SSR4P51571 173 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 SRSF7Q16629 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 C1QTNF5Q9BXJ0 243 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
EFEMP1-202ENST00000394555 TRAV24A0A0B4J272 114 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 CTXND1A0A1B0GTU2 59 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 IGLV2-14P01704 120 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 MPLP40238 635 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 Q8NFD4 153 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 NEIL1Q96FI4 390 aaPredicted RBP13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 GJE1A6NN92 205 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 C11orf94C9JXX5 98 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 CBR3O75828 277 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 KRASP01116 189 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 HNF1AP20823 631 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 TFF3Q07654 80 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 CEACAM21Q3KPI0 293 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 SPINK9Q5DT21 86 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 OCIAD1Q9NX40 245 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 A0A1W2PQM1 296 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 NGFP01138 241 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 RAB4AP20338 218 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 NPPCP23582 126 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 SRP14P37108 136 aaKnown RBP13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 CCL7P80098 99 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 TDRG1Q3Y452 100 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 ACSF3Q4G176 576 aaPredicted RBP13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 OR10D3Q8NH80 312 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 SPSB4Q96A44 273 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 TMEM208Q9BTX3 173 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
EFEMP1-202ENST00000394555 URB1O60287 2271 aaKnown RBP13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 HPRT1P00492 218 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 NPSP0C0P6 89 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 OR10J1P30954 320 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 OR5P3Q8WZ94 311 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 MANBALQ9NQG1 85 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 IGHV3-64DA0A0J9YX35 117 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 WIPI1Q5MNZ9 446 aaPredicted RBP13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 REPIN1Q9BWE0 567 aaKnown RBP13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 GOLT1BQ9Y3E0 138 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 USF3Q68DE3 2245 aa13.89□□□□□ -0.19
EFEMP1-202ENST00000394555 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 C1QTNF9P0C862 333 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 OR3A1P47881 315 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 PPP1CBP62140 327 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 HLA-CQ95604 372 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 CCDC74BQ96LY2 380 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 RBMXL2O75526 392 aaKnown RBP13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 RFPL3SP0C7P2 107 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 G6PCP35575 357 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 ZNF709Q8N972 641 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 PRDM14Q9GZV8 571 aa13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 RIMS4Q9H426 269 aaPredicted RBP13.88□□□□□ -0.19
EFEMP1-202ENST00000394555 PATZ1Q9HBE1 687 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms