RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 KBTBD11O94819 623 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 PMCHP20382 165 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 CEBPDP49716 269 aaPredicted RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 TCL1AP56279 114 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 PRDX4Q13162 271 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 NFAM1Q8NET5 270 aaPredicted RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 CLDN23Q96B33 292 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 RYDENQ9NUL5 291 aaKnown RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 TRAPPC2LQ9UL33 140 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 A0A1B0GWJ7 208 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 DEFB108AA8MXU0 73 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 C5orf67F2Z3F1 127 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 DLEU1O43261 78 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 ZIC3O60481 467 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 UCP1P25874 307 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 MMDQ15546 238 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 MRPL21Q7Z2W9 205 aaKnown RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 CXorf67Q86X51 503 aaPredicted RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 C11orf42Q8N5U0 333 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 CMTM2Q8TAZ6 248 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 FOXB1Q99853 325 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 BOD1L1Q8NFC6 3051 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 A0A0G2JMM0 328 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 A0A1W2PPB8 328 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 A0A1W2PRS3 328 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 KIR3DP1A8MWS1 328 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 TMEM211Q6ICI0 200 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 TPRX1Q8N7U7 411 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 ZIC4Q8N9L1 334 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 C8orf33Q9H7E9 229 aaPredicted RBP13.92□□□□□ -0.18
PHTF1-205ENST00000393357 OR6C3Q9NZP0 311 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 FOXJ2Q9P0K8 574 aa13.92□□□□□ -0.18
PHTF1-205ENST00000393357 POLEQ07864 2286 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 RAMP3O60896 148 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 RHBDL1O75783 438 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 ADMP35318 185 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 WIPI1Q5MNZ9 446 aaPredicted RBP13.91□□□□□ -0.18
PHTF1-205ENST00000393357 MKXQ8IYA7 352 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 CPEB3Q8NE35 698 aaKnown RBP13.91□□□□□ -0.18
PHTF1-205ENST00000393357 TMEM170AQ8WVE7 144 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 RNF24Q9Y225 148 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 LMO7DNF2Z398 122 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 CA6P23280 308 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 OTX2P32243 289 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 CYP2G1PQ6ZSU1 146 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 WDR61Q9GZS3 305 aaKnown RBP13.91□□□□□ -0.18
PHTF1-205ENST00000393357 WNT10AQ9GZT5 417 aa13.91□□□□□ -0.18
PHTF1-205ENST00000393357 TIMM8BQ9Y5J9 83 aaPredicted RBP13.91□□□□□ -0.18
PHTF1-205ENST00000393357 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 SYNGR3O43761 229 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 IGKV1-5P01602 117 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 NTF3P20783 257 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 HIST3H3Q16695 136 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 RFESDQ8TAC1 157 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
PHTF1-205ENST00000393357 PPP1CBP62140 327 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 KCNIP4Q6PIL6 250 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 GBGT1Q8N5D6 347 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 RIMS4Q9H426 269 aaPredicted RBP13.9□□□□□ -0.18
PHTF1-205ENST00000393357 MED12LQ86YW9 2145 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 NPIPB13A6NJU9 1138 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 NPIPB4C9JG80 1138 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 ZG16O60844 167 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
PHTF1-205ENST00000393357 RAB35Q15286 201 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 LBHQ53QV2 105 aaPredicted RBP13.9□□□□□ -0.18
PHTF1-205ENST00000393357 CTDSP1Q9GZU7 261 aa13.9□□□□□ -0.18
PHTF1-205ENST00000393357 CADP27708 2225 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 NPPCP23582 126 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 ZNF90Q03938 601 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 SLC25A45Q8N413 288 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 CADM4Q8NFZ8 388 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 RAB40CQ96S21 281 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 WNT5BQ9H1J7 359 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 CLEC1BQ9P126 229 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 LOC102725191A0A1B0GVB3 256 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 TP53I11O14683 189 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 SERF1AO75920 110 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 SFTPCP11686 197 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 PI4KAP42356 2102 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 IER3P46695 156 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 SUMO3P55854 103 aaPredicted RBP13.89□□□□□ -0.19
PHTF1-205ENST00000393357 ARF1P84077 181 aaKnown RBP13.89□□□□□ -0.19
PHTF1-205ENST00000393357 DAZAP2Q15038 168 aaPredicted RBP13.89□□□□□ -0.19
PHTF1-205ENST00000393357 FAM27BQ5VT28 67 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 OR1L1Q8NH94 360 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 DNAJC4Q9NNZ3 241 aa13.89□□□□□ -0.19
PHTF1-205ENST00000393357 IGHV1OR15-9A0A0B4J2B8 117 aa13.88□□□□□ -0.19
PHTF1-205ENST00000393357 CEACAM6P40199 344 aa13.88□□□□□ -0.19
PHTF1-205ENST00000393357 DEPPQ9NTK1 212 aa13.88□□□□□ -0.19
PHTF1-205ENST00000393357 IGLV3-1P01715 115 aa13.88□□□□□ -0.19
PHTF1-205ENST00000393357 SLC25A6P12236 298 aa13.88□□□□□ -0.19
PHTF1-205ENST00000393357 LRRC75BQ2VPJ9 315 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms