RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
ERCC2-204ENST00000391945 REG1BP48304 166 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 NHLH1Q02575 133 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 CXorf66Q5JRM2 361 aaPredicted RBP10.86□□□□□ -0.67
ERCC2-204ENST00000391945 ZNF474Q6S9Z5 364 aaPredicted RBP10.86□□□□□ -0.67
ERCC2-204ENST00000391945 SPSB4Q96A44 273 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 COMMD5Q9GZQ3 224 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 GCM1Q9NP62 436 aa10.86□□□□□ -0.67
ERCC2-204ENST00000391945 MBPP02686 304 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 DAOP14920 347 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 ARSJQ5FYB0 599 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 TUBG2Q9NRH3 451 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 PGLYRP1O75594 196 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 TMEM42Q69YG0 159 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 TRAT1Q6PIZ9 186 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 IL34Q6ZMJ4 242 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 NIPSNAP3BQ9BS92 247 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 UBTD1Q9HAC8 227 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 UBE2L5PA0A1B0GUS4 154 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 RAB19A4D1S5 217 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 A8MXE2 369 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 CST9LP1Q5W188 147 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 UQCC3Q6UW78 93 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 MYPOPQ86VE0 399 aaPredicted RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 OR52M1Q8NGK5 317 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 MRPL37Q9BZE1 423 aaKnown RBP10.85□□□□□ -0.67
ERCC2-204ENST00000391945 NOTCH2Q04721 2471 aa10.85□□□□□ -0.67
ERCC2-204ENST00000391945 TRAV24A0A0B4J272 114 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 TRIM77I1YAP6 450 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 CNIH1O95406 144 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MRGPRGQ86SM5 289 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 GNPNAT1Q96EK6 184 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 RAB1BQ9H0U4 201 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 SYNGR2O43760 224 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 HBE1P02100 147 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 C1orf147Q96MC9 270 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 NUDT19A8MXV4 375 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 PGA5P0DJD9 388 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 TIMP3P35625 211 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 HOXA4Q00056 320 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MBD3L4A6NDZ8 208 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MBD3L3A6NE82 208 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MBD3L5A6NJ08 208 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 H0YIZ8 118 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 CDS2O95674 445 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 STUMQ69YW2 141 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MBD3L2Q8NHZ7 208 aaPredicted RBP10.84□□□□□ -0.67
ERCC2-204ENST00000391945 R3HDM4Q96D70 268 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 MSRB2Q9Y3D2 182 aa10.84□□□□□ -0.67
ERCC2-204ENST00000391945 ADH4P08319 380 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 SNX22Q96L94 193 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 OR5B12Q96R08 314 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 ZDHHC8Q9ULC8 765 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 IGKV1D-13A0A0B4J2D9 117 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 PTBP3O95758 552 aaKnown RBP10.83□□□□□ -0.68
ERCC2-204ENST00000391945 IGKV1-13P0DP09 117 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 DYNLT3P51808 116 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 EWSR1Q01844 656 aaKnown RBP eCLIP10.83□□□□□ -0.683e-7■■■□□ 15.4
ERCC2-204ENST00000391945 WDR82Q6UXN9 313 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 WDR31Q8NA23 367 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 POC1AQ8NBT0 407 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 GTF3AQ92664 365 aaKnown RBP10.83□□□□□ -0.68
ERCC2-204ENST00000391945 RAB40CQ96S21 281 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 RNF115Q9Y4L5 304 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 SLC25A15Q9Y619 301 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 HKR1P10072 659 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 FHITP49789 147 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 RAB7AP51149 207 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 RUNX1Q01196 453 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 COLCA1Q6ZS62 124 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 LFNGQ8NES3 379 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 MRPL30Q8TCC3 161 aaKnown RBP10.83□□□□□ -0.68
ERCC2-204ENST00000391945 LHX4Q969G2 390 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 Q9UFV3 132 aa10.83□□□□□ -0.68
ERCC2-204ENST00000391945 HMGN3Q15651 99 aa10.82□□□□□ -0.68
ERCC2-204ENST00000391945 CLEC12BQ2HXU8 276 aa10.82□□□□□ -0.68
ERCC2-204ENST00000391945 ATRAIDQ6UW56 229 aa10.82□□□□□ -0.68
ERCC2-204ENST00000391945 PUSL1Q8N0Z8 303 aaKnown RBP10.82□□□□□ -0.68
ERCC2-204ENST00000391945 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
ERCC2-204ENST00000391945 SAT2Q96F10 170 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms