RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ZDHHC16Q969W1 377 aa15.26■□□□□ 0.03
ERCC2-201ENST00000391941 SLC39A9Q9NUM3 307 aa15.26■□□□□ 0.03
ERCC2-201ENST00000391941 GPR179Q6PRD1 2367 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 DNPH1O43598 174 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 P04436 131 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 GALR1P47211 349 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 UBE2G2P60604 165 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 RPL23P62829 140 aaKnown RBP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 TFF3Q07654 80 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 PNRC1Q12796 327 aaPredicted RBP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 GCSAMLQ5JQS6 135 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 RBM14Q96PK6 669 aaKnown RBP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 REPIN1Q9BWE0 567 aaKnown RBP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 PRDM14Q9GZV8 571 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 CDH20Q9HBT6 801 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 MRPL33O75394 65 aaKnown RBP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 SRD5A2P31213 254 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 SRSF7Q16629 238 aaKnown RBP eCLIP15.25■□□□□ 0.03
ERCC2-201ENST00000391941 OR1P1Q8NH06 330 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 RAB40CQ96S21 281 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 TMEM242Q9NWH2 141 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 VAX2Q9UIW0 290 aa15.25■□□□□ 0.03
ERCC2-201ENST00000391941 A0A0U1RQK1 487 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 G6PCP35575 357 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 RNPS1Q15287 305 aaKnown RBP15.24■□□□□ 0.03
ERCC2-201ENST00000391941 RIPPLY2Q5TAB7 128 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 ABLIM2Q6H8Q1 611 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 PARLQ9H300 379 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 DLL3Q9NYJ7 618 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 CFIP05156 583 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 BTNL3Q6UXE8 466 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 COLCA1Q6ZS62 124 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 TMEM183AQ8IXX5 376 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 DERL1Q9BUN8 251 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 WDR61Q9GZS3 305 aaKnown RBP15.24■□□□□ 0.03
ERCC2-201ENST00000391941 PITPNC1Q9UKF7 332 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 KNTC1P50748 2209 aa15.24■□□□□ 0.03
ERCC2-201ENST00000391941 FAM166BA8MTA8 275 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 PFN1P07737 140 aaKnown RBP15.23■□□□□ 0.03
ERCC2-201ENST00000391941 CTXN2P0C2S0 81 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 WNT5AP41221 380 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 CEACAM21Q3KPI0 293 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 MBD3L1Q8WWY6 194 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 DUSP23Q9BVJ7 150 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 TRBV24-1A0A075B6N3 115 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 FGF5P12034 268 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 MEF2BQ02080 365 aaPredicted RBP15.23■□□□□ 0.03
ERCC2-201ENST00000391941 SLC38A11Q08AI6 406 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 LRRC75BQ2VPJ9 315 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 BSXQ3C1V8 233 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 C12orf49Q9H741 205 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 CBLN4Q9NTU7 201 aa15.23■□□□□ 0.03
ERCC2-201ENST00000391941 A8MWP6 167 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 H7BYZ3 331 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 NUPR1O60356 82 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 PAGE4O60829 102 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 TMEM241Q24JQ0 296 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 CXorf67Q86X51 503 aaPredicted RBP15.22■□□□□ 0.03
ERCC2-201ENST00000391941 KCNE4Q8WWG9 221 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 TAF15Q92804 592 aaKnown RBP eCLIP15.22■□□□□ 0.03
ERCC2-201ENST00000391941 PHF7Q9BWX1 381 aaPredicted RBP15.22■□□□□ 0.03
ERCC2-201ENST00000391941 IFNA10P01566 189 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 OPN1MWP04001 364 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 OPN1MW2P0DN77 364 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 OPN1MW3P0DN78 364 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 JOSD1Q15040 202 aaPredicted RBP15.22■□□□□ 0.03
ERCC2-201ENST00000391941 SAP25Q8TEE9 199 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 PPP5D1E7EU14 171 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 S100GP29377 79 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 TMEM41BQ5BJD5 291 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 TCF23Q7RTU1 214 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 TRAPPC2LQ9UL33 140 aa15.22■□□□□ 0.03
ERCC2-201ENST00000391941 MRPS17Q9Y2R5 130 aaKnown RBP15.22■□□□□ 0.03
ERCC2-201ENST00000391941 ST8SIA5O15466 376 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 CYC1P08574 325 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 NPPCP23582 126 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 CEACAM6P40199 344 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 MRGPRGQ86SM5 289 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 TPRX1Q8N7U7 411 aa15.21■□□□□ 0.03
ERCC2-201ENST00000391941 NUBP1P53384 320 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 TAS2R60P59551 318 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 MRPL41Q8IXM3 137 aaKnown RBP15.21■□□□□ 0.02
ERCC2-201ENST00000391941 SAXO1Q8IYX7 474 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 FAM58AQ8N1B3 248 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 TMEM256Q8N2U0 113 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 FGFRL1Q8N441 504 aa15.21■□□□□ 0.02
ERCC2-201ENST00000391941 DEGS1O15121 323 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 ALKBH6Q3KRA9 238 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 Q3ZCU0 254 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 OR1L1Q8NH94 360 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 NAT8Q9UHE5 227 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 SVILO95425 2214 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 RBMXL2O75526 392 aaKnown RBP15.2■□□□□ 0.02
ERCC2-201ENST00000391941 IGHV3-13P01766 116 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 IGHV3-7P01780 117 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 RPL30P62888 115 aaKnown RBP15.2■□□□□ 0.02
ERCC2-201ENST00000391941 TEX38Q6PEX7 206 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 SPEM1Q8N4L4 309 aa15.2■□□□□ 0.02
ERCC2-201ENST00000391941 DRAM1Q8N682 238 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms