RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 GCSAMQ8N6F7 178 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 PLXNA2O75051 1894 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 IGKV1-9A0A0C4DH69 117 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 C7orf66A4D0T2 115 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 DAOP14920 347 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 RPL35P42766 123 aaKnown RBP11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 DYNLT3P51808 116 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 OR10A7Q8NGE5 316 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 STARD4Q96DR4 205 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 FAM216BQ8N7L0 139 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 RSPO3Q9BXY4 272 aaPredicted RBP11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
PTPRN2-202ENST00000389416 DCAF12L2Q5VW00 463 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 KPTNQ9Y664 436 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 J3QR06 171 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 J3QRE1 110 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 M0QZ24 198 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 WISP1O95388 367 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 LY86O95711 162 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 TIMP3P35625 211 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 MIDNQ504T8 468 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 DENND4CQ5VZ89 1909 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 HMSDA8MTL9 139 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 ORM2P19652 201 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 CCDC144NLQ6NUI1 221 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 ACP7Q6ZNF0 438 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 HIST2H3AQ71DI3 136 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 DTX1Q86Y01 620 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 NABP1Q96AH0 204 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 MS4A7Q9GZW8 240 aaPredicted RBP11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 GHITMQ9H3K2 345 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 C19orf12Q9NSK7 152 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
PTPRN2-202ENST00000389416 CDRT15L2A8MXV6 281 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 IFNL4K9M1U5 179 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 KCNAB3O43448 404 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 TIGITQ495A1 244 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 TVP23CQ96ET8 276 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 C14orf79Q96F83 325 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 SMIM7Q9BQ49 75 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 SLC25A22Q9H936 323 aa11.15□□□□□ -0.63
PTPRN2-202ENST00000389416 IGHV1-18A0A0C4DH31 117 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 IL18BPO95998 194 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 LGALS7P47929 136 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 C17orf100A8MU93 164 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 B3GALNT1O75752 331 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 CDKN1AP38936 164 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 FAM209AQ5JX71 171 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 DCTN5Q9BTE1 182 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 TMEM147Q9BVK8 224 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 IGHV3-21A0A0B4J1V1 117 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 A0A1B0GU03 582 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 OR1L8Q8NGR8 309 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 MIOXQ9UGB7 285 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 ZNF785A8K8V0 405 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 NUDT19A8MXV4 375 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 ALX3O95076 343 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 RHOFQ9HBH0 211 aa11.14□□□□□ -0.63
PTPRN2-202ENST00000389416 H7BYZ3 331 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 K7ENP7 123 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 HPRT1P00492 218 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 IGFBP3P17936 291 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 ABHD12Q8N2K0 398 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 PAQR4Q8N4S7 273 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 CCL19Q99731 98 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 PTPN13Q12923 2485 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 PGLYRP1O75594 196 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 NPY1RP25929 384 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 IZUMO4Q1ZYL8 232 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 PRR30Q53SZ7 412 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 ZFP82Q8N141 532 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 TIMM9Q9Y5J7 89 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 TDGF1P13385 188 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 CRYGSP22914 178 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 P2RY1P47900 373 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 P2RY4P51582 365 aa11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
PTPRN2-202ENST00000389416 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms