RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CXorf1O96002 111 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 CRISP2P16562 243 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 CCL1P22362 96 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 NPY1RP25929 384 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 PSG5Q15238 335 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 C16orf82Q7Z2V1 217 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 OR1L4Q8NGR5 311 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 PRNDQ9UKY0 176 aa13.85□□□□□ -0.19
PTPRN2-201ENST00000389413 HPRT1P00492 218 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 TRGC2P03986 189 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 RFPL3SP0C7P2 107 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 PGA5P0DJD9 388 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 ZNF645Q8N7E2 425 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 OR10S1Q8NGN2 331 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 P2RX4Q99571 388 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 WIPI2Q9Y4P8 454 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 IGLV3-32A0A0A0MS00 114 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 PAX5Q02548 391 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 FAM131CQ96AQ9 280 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 RNF2Q99496 336 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 TIMP4Q99727 224 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 TRGV8A0A0C4DH27 118 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 GATCO43716 136 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 UBE2L3P68036 154 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 MRPL14Q6P1L8 145 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 FAM89BQ8N5H3 189 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 LSM10Q969L4 123 aaKnown RBP13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 MISP3Q96FF7 219 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 ASXL3Q9C0F0 2248 aa13.84□□□□□ -0.19
PTPRN2-201ENST00000389413 A0A1W2PN81 502 aa13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 SLC25A5P05141 298 aaKnown RBP13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 ZNF837Q96EG3 531 aaPredicted RBP13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 IMMP1LQ96LU5 166 aa13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 HES7Q9BYE0 225 aa13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 LINC00470Q9BZP3 86 aa13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 RBKSQ9H477 322 aa13.83□□□□□ -0.19
PTPRN2-201ENST00000389413 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 M0R296 226 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 CDCP2Q5VXM1 449 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 TMEM230Q96A57 120 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 DOK5Q9P104 306 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF319Q9P2F9 582 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 TRAV38-1A0A0B4J264 116 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 F8VVB4 439 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 F8VWA3 439 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 TMPRSS2O15393 492 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 C1orf174Q8IYL3 243 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 RTTNQ86VV8 2226 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 H0YIZ8 118 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 FAM166AQ6J272 317 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 OR1L1Q8NH94 360 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 TMEM45BQ96B21 275 aa13.83□□□□□ -0.2
PTPRN2-201ENST00000389413 CD82P27701 267 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 TMEM183BQ1AE95 376 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 COX19Q49B96 90 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 MDC1Q14676 2089 aaKnown RBP13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 IGSF23A1L1A6 192 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 MGST3O14880 152 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 CTSSP25774 331 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 FHL1Q13642 323 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 CALHM1Q8IU99 346 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 AURKAIP1Q9NWT8 199 aaPredicted RBP13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 LDLRAD4O15165 306 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 CLPSP04118 112 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 IZUMO4Q1ZYL8 232 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF826PQ6ZT77 177 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 BIVMQ86UB2 503 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 ARL2-SNX15V9GYD0 113 aa13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 MDKP21741 143 aaPredicted RBP13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 CISD1Q9NZ45 108 aaKnown RBP13.82□□□□□ -0.2
PTPRN2-201ENST00000389413 CACNA1EQ15878 2313 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 MPDU1O75352 247 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 EIF3GO75821 320 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 RPL29P47914 159 aaKnown RBP13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 OR5P3Q8WZ94 311 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 IGHV3OR15-7A0A075B7D8 119 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 CFHR1Q03591 330 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 TNFRSF9Q07011 255 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 ZNF552Q9H707 407 aaPredicted RBP13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 GNB4Q9HAV0 340 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 SERTM2A0A1B0GWG4 89 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 FGF16O43320 207 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 A0A0A6YYD4 124 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 PQLC2LA1A4F0 135 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 AMTP48728 403 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 SPCS3P61009 180 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 PKIAP61925 76 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 RPEQ96AT9 228 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 VOPP1Q96AW1 172 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 LYZL4Q96KX0 146 aa13.81□□□□□ -0.2
PTPRN2-201ENST00000389413 HELTA6NFD8 242 aa13.8□□□□□ -0.2
PTPRN2-201ENST00000389413 RBP4P02753 201 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms