RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FBXL15Q9H469 300 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TMEM185BQ9H7F4 350 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 SLC2A9Q9NRM0 540 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 NMRK1Q9NWW6 199 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 GCNT4Q9P109 453 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TAAR3PQ9P1P4 343 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 KLK9Q9UKQ9 250 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 BLOC1S6Q9UL45 172 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 TIMM9Q9Y5J7 89 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 GREB1Q4ZG55 1949 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 ABCA12Q86UK0 2595 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 MUC4Q99102 2169 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 DSTQ03001 7570 aaKnown RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 RALGAPA2Q2PPJ7 1873 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 SCAF11Q99590 1463 aaKnown RBP-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 UNC79Q9P2D8 2635 aa-0.35□□□□□ -2.47
SNORD28-201ENST00000384706 MCM3APO60318 1980 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TTC28Q96AY4 2481 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ANAPC1Q9H1A4 1944 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 DOCK3Q8IZD9 2030 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TRAV38-1A0A0B4J264 116 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 OR2T8A6NH00 312 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 FAM183AA6NL82 134 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 IBA57-AS1B1ANH7 110 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 H7C2G1 150 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 I3L4J1 428 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CXCL11O14625 94 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SIVA1O15304 175 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CDK14O94921 469 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 NPYP01303 97 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 PPBPP02775 128 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CD3DP04234 171 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 OR13C7P0DN81 318 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ORM2P19652 201 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CPN2P22792 545 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 PSMB8P28062 276 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 GABRR2P28476 465 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TSPOP30536 169 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ALDH3A1P30838 453 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SLCO1A2P46721 670 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 GCLMP48507 274 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ETV1P50549 477 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 STC1P52823 247 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TAS2R60P59551 318 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TPI1P60174 286 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 HBG1P69891 147 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 HBG2P69892 147 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SLC35B1P78383 322 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 GNA12Q03113 381 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SPAG1Q07617 926 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 C12orf74Q32Q52 190 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 HENMT1Q5T8I9 393 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CARD17Q5XLA6 110 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 DUPD1Q68J44 220 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 AMTNQ6UX39 209 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 Q6ZS92 163 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 EIF3MQ7L2H7 374 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 OR2W3Q7Z3T1 314 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 PPP1R42Q7Z4L9 355 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 MTERF4Q7Z6M4 381 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 PQLC3Q8N755 202 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 DRAXINQ8NBI3 349 aaPredicted RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 OR8B3Q8NGG8 313 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 OR5D18Q8NGL1 313 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CLDND2Q8NHS1 167 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SMCR5Q8TEV8 140 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TNFAIP8L1Q8WVP5 186 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 RASD2Q96D21 266 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TBC1D31Q96DN5 1066 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TRNT1Q96Q11 434 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CHP1Q99653 195 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 UTP23Q9BRU9 249 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 SUCNR1Q9BXA5 334 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 BEX2Q9BXY8 128 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 EBPLQ9BY08 206 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TTTY13Q9BZ97 58 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CLSTN2Q9H4D0 955 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ELOVL6Q9H5J4 265 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 GEMIN7Q9H840 131 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ASH1LQ9NR48 2969 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 ZMAT5Q9UDW3 170 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 DNAJC12Q9UKB3 198 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 HHLA2Q9UM44 414 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 DNMT1P26358 1616 aaKnown RBP-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 KNTC1P50748 2209 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 INSRP06213 1382 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 TONSLQ96HA7 1378 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CACNA1AO00555 2505 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 PTPRSQ13332 1948 aa-0.36□□□□□ -2.47
SNORD28-201ENST00000384706 CACNA1HO95180 2353 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 CITO14578 2027 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 HEATR5AQ86XA9 2040 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 MYO15BQ96JP2 1530 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TRAV7A0A075B6U4 112 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TRAV8-7A0A075B6U6 113 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 TRAV8-2A0A0B4J237 113 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 ANKRD20A5PA0PJZ0 165 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 GOLGA8OA6NCC3 632 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 OR51F1A6NGY5 319 aa-0.37□□□□□ -2.47
SNORD28-201ENST00000384706 NCF1BA6NI72 391 aaPredicted RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms