RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ACP7Q6ZNF0 438 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM182Q6ZP80 229 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 LRP11Q86VZ4 500 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 CBLN2Q8IUK8 224 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 SVBPQ8N300 66 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 OR5C1Q8NGR4 320 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 COQ2Q96H96 371 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 SEC11CQ9BY50 192 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 CXXC4Q9H2H0 198 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 PLEKHF2Q9H8W4 249 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 FAM215AQ9Y5M1 114 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 DOCK11Q5JSL3 2073 aa6.69□□□□□ -1.34
PDLIM5-204ENST00000380176 A0A1B0GV50 99 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MBD3L4A6NDZ8 208 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MBD3L3A6NE82 208 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MBD3L5A6NJ08 208 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 C12orf77C9JDV5 145 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 IGKV1-5P01602 117 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 PVALBP20472 110 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 KITLGP21583 273 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 LMO1P25800 156 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 OR3A1P47881 315 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 DYNLT3P51808 116 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 VAMP2P63027 116 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SPRNQ5BIV9 151 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF474Q6S9Z5 364 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MOB1BQ7L9L4 216 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 DRAM1Q8N682 238 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MBD3L2Q8NHZ7 208 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 IL22RA2Q969J5 263 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SCRT1Q9BWW7 348 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SLC25A15Q9Y619 301 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 CEACAM1P13688 526 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 NFYBP25208 207 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ATP6V0CP27449 155 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SNCAP37840 140 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 CAMLGP49069 296 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF83P51522 516 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 RTP5Q14D33 572 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ZNF718Q3SXZ3 478 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 IGFL3Q6UXB1 125 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 SLC24A4Q8NFF2 622 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 OR52L2PQ8NGH6 319 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 C5orf30Q96GV9 206 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 C12orf57Q99622 126 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 PIEZO2Q9H5I5 2752 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 PLCE1Q9P212 2302 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 PTPRZ1P23471 2315 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ACACAQ13085 2346 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 TSPAN15O95858 294 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 PRH1P02810 166 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 S100GP29377 79 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 GCH1P30793 250 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 GLIPR1P48060 266 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 RUNX1Q01196 453 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 COL10A1Q03692 680 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 Q6ZS92 163 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 RBMXL3Q8N7X1 1067 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 MRGPRDQ8TDS7 321 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 C19orf12Q9NSK7 152 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 CACNG5Q9UF02 275 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 DUSP13Q9UII6 198 aa6.68□□□□□ -1.34
PDLIM5-204ENST00000380176 ZGRF1Q86YA3 2104 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 CUL9Q8IWT3 2517 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM30CPA0ZSE6 113 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 WRBO00258 174 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 KLK10O43240 276 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 SIAH2O43255 324 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 HBZP02008 142 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 EGR1P18146 543 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 DVL1P1P54792 670 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 P2RY6Q15077 328 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 MBNL2Q5VZF2 373 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 C22orf34Q6ZV56 151 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 SPAG16Q8N0X2 631 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 OR2Z1Q8NG97 314 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 S100PBPQ96BU1 408 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 ABHD14BQ96IU4 210 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 AKR1E2Q96JD6 320 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 DCTN5Q9BTE1 182 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 DSCAMO60469 2012 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 A0A1B0GU03 582 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 K7N7A8 449 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 RAMP3O60896 148 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 RAB4AP20338 218 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 SSTR5P35346 364 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 PPP1CCP36873 323 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 TAGLN2P37802 199 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 GABRA2P47869 451 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 LINC00205P59089 165 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 RPL30P62888 115 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 TMEM267Q0VDI3 215 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 OR2B11Q5JQS5 317 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 ETV3LQ6ZN32 361 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 CD177Q8N6Q3 437 aa6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 RNASE11Q8TAA1 199 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-204ENST00000380176 RFESDQ8TAC1 157 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms