RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 PPP5D1E7EU14 171 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 LCATP04180 440 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 TK1P04183 234 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 SP1P08047 785 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 SFTPCP11686 197 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 RAB35Q15286 201 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 BATFQ16520 125 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 ADGRG7Q96K78 797 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 OXGR1Q96P68 337 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 TMEM242Q9NWH2 141 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 PRSS50Q9UI38 385 aa11.77□□□□□ -0.52
SNCAIP-203ENST00000379538 IGKV1D-33P01593 117 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 IGKV1-33P01594 117 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 EGR1P18146 543 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 GGNQ86UU5 652 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 ABHD3Q8WU67 409 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 TMEM56Q96MV1 263 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF703Q9H7S9 590 aaPredicted RBP11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 CACNA1DQ01668 2161 aa11.77□□□□□ -0.53
SNCAIP-203ENST00000379538 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 H1FOOQ8IZA3 346 aaPredicted RBP11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 SNIP1Q8TAD8 396 aaKnown RBP11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 PIGCQ92535 297 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 ITPR1Q14643 2758 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 M0R143 59 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF737O75373 536 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 IFNA5P01569 189 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 SRD5A2P31213 254 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 CHRNA7P36544 502 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 MALLQ13021 153 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 CST9LP1Q5W188 147 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 SLC25A26Q70HW3 274 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 HAPLN4Q86UW8 402 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 OR10D3Q8NH80 312 aa11.76□□□□□ -0.53
SNCAIP-203ENST00000379538 H7BYZ3 331 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF766Q5HY98 468 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 ZDHHC23Q8IYP9 409 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 MDS2Q8NDY4 140 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 OR2V1Q8NHB1 315 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 KIAA1549Q9HCM3 1950 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 TRAV39A0A0B4J263 110 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 IGKV1-6A0A0C4DH72 117 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 NRASP01111 189 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 GCGP01275 180 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 VDAC1P21796 283 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 CTSSP25774 331 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 RAB4BP61018 213 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 RAC1P63000 192 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 KCNMB1Q16558 191 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 KCNE4Q8WWG9 221 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 ABI3Q9P2A4 366 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 PPIAL4AQ9Y536 164 aa11.75□□□□□ -0.53
SNCAIP-203ENST00000379538 PDCD6O75340 191 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 IRF2P14316 349 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 SELEP16581 610 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 TFPI2P48307 235 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 PCP4P48539 62 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 TNFSF10P50591 281 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 UCP3P55916 312 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 GFRA1P56159 465 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 CARD18P57730 90 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 RPP25LQ8N5L8 163 aaKnown RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 SCGB1C1Q8TD33 95 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 GOLT1BQ9Y3E0 138 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF705FA8MVS1 300 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF705DP0CH99 300 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 ZNF705BP0CI00 300 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 PSG2P11465 335 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 OTX1P32242 354 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 MDH2P40926 338 aaKnown RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 RELQ04864 619 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 IL24Q13007 206 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 EXTL1Q92935 676 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 LHX4Q969G2 390 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 CRIM1Q9NZV1 1036 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 VAX2Q9UIW0 290 aa11.74□□□□□ -0.53
SNCAIP-203ENST00000379538 BOKQ9UMX3 212 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms