RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 ZDHHC23Q8IYP9 409 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 GNPNAT1Q96EK6 184 aaPredicted RBP11.76□□□□□ -0.53
SF1-205ENST00000377394 ARHGAP21Q5T5U3 1957 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 DUXBA0A1W2PPF3 345 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 M0QZK8 103 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 HSPB6O14558 160 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
SF1-205ENST00000377394 GGCTO75223 188 aaKnown RBP11.76□□□□□ -0.53
SF1-205ENST00000377394 VDAC1P21796 283 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 CCKARP32238 428 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 ATP23Q9Y6H3 246 aa11.76□□□□□ -0.53
SF1-205ENST00000377394 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 LHX2P50458 406 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 COTL1Q14019 142 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 SSPNQ14714 243 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 SMIM7Q9BQ49 75 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 CELA3AP09093 270 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 SRYQ05066 204 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 DCAF12Q5T6F0 453 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 PCSK4Q6UW60 755 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 C20orf204Q6ZNR8 217 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
SF1-205ENST00000377394 TUSC5Q8IXB3 177 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
SF1-205ENST00000377394 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
SF1-205ENST00000377394 H7BYZ3 331 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 SYNGR1O43759 233 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 CER1O95813 267 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 NGFP01138 241 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 PAX9P55771 341 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 TAS2R30P59541 319 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 MRPL30Q8TCC3 161 aaKnown RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 RBKSQ9H477 322 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 ZNF552Q9H707 407 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 TAAR3PQ9P1P4 343 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 PRSS50Q9UI38 385 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 FREM1Q5H8C1 2179 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 H0Y980 276 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 TRAPPC2LH3BP13 241 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 CHST1O43916 411 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 CD82P27701 267 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 CLDN18P56856 261 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 RBX1P62877 108 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 ACTL10Q5JWF8 245 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 C6orf15Q6UXA7 325 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 C11orf42Q8N5U0 333 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 APOBEC3DQ96AK3 386 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 PRO3102Q9H379 93 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
SF1-205ENST00000377394 BOKQ9UMX3 212 aaPredicted RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
SF1-205ENST00000377394 OR10J1P30954 320 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 BAXQ07812 192 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 FBXW9Q5XUX1 488 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 SLC25A24Q6NUK1 477 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 MKXQ8IYA7 352 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 ZNF703Q9H7S9 590 aaPredicted RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 NEURL1O76050 574 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 H1FOOQ8IZA3 346 aaPredicted RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 OR2M7Q8NG81 312 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 LILRA1O75019 489 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 RPL23P62829 140 aaKnown RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
SF1-205ENST00000377394 TGIF2LYQ8IUE0 185 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 UBALD2Q8IYN6 164 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 ZNF295-AS1Q8N0V1 137 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 OR5T1Q8NG75 326 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 POM121L2Q96KW2 1035 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 ZNF488Q96MN9 340 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 OR5B12Q96R08 314 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 FOXJ2Q9P0K8 574 aa11.73□□□□□ -0.53
SF1-205ENST00000377394 COL27A1Q8IZC6 1860 aaPredicted RBP11.72□□□□□ -0.53
SF1-205ENST00000377394 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
SF1-205ENST00000377394 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
SF1-205ENST00000377394 CNN1P51911 297 aaKnown RBP11.72□□□□□ -0.53
SF1-205ENST00000377394 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
SF1-205ENST00000377394 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
SF1-205ENST00000377394 OR5P3Q8WZ94 311 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms