RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 NUBP2Q9Y5Y2 271 aa10.57□□□□□ -0.72
CBWD3-203ENST00000377344 ITPR3Q14573 2671 aa10.57□□□□□ -0.72
CBWD3-203ENST00000377344 H2AFB2P0C5Z0 115 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
CBWD3-203ENST00000377344 OXA1LQ15070 435 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 SURF2Q15527 256 aaPredicted RBP10.56□□□□□ -0.72
CBWD3-203ENST00000377344 Q3ZCU0 254 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 PHLDA2Q53GA4 152 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 LY6G6FQ5SQ64 297 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 NCR3LG1Q68D85 454 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 CENPSQ8N2Z9 138 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 TNFRSF14Q92956 283 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 UPRTQ96BW1 309 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 AGMATQ9BSE5 352 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 BEX2Q9BXY8 128 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 IFI27L2Q9H2X8 130 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 UNKLQ9H9P5 680 aaKnown RBP10.56□□□□□ -0.72
CBWD3-203ENST00000377344 BEX1Q9HBH7 125 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 RNASEK-C17orf49H0YIS7 233 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 ITGB1BP1O14713 200 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 ARG1P05089 322 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 AKR1C4P17516 323 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 CD34P28906 385 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 GNRHRP30968 328 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 UCP3P55916 312 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 CHPT1Q8WUD6 406 aa10.56□□□□□ -0.72
CBWD3-203ENST00000377344 WNK2Q9Y3S1 2297 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 GPR31O00270 319 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 RAB29O14966 203 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 TNFSF12O43508 249 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 CTSDP07339 412 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-203ENST00000377344 ANXA7P20073 488 aaKnown RBP10.55□□□□□ -0.72
CBWD3-203ENST00000377344 RPL39P5Q59GN2 51 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 DRAM1Q8N682 238 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 MINDY2Q8NBR6 621 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF596Q8TC21 504 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-203ENST00000377344 RSRP1Q9BUV0 290 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 C5orf66Q9H5L9 145 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 PIPOXQ9P0Z9 390 aa10.55□□□□□ -0.72
CBWD3-203ENST00000377344 IGHV3OR16-10A0A075B7F0 116 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 J3QLI3 93 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 SLC22A5O76082 557 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 IGLV1-47P01700 117 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-203ENST00000377344 S100GP29377 79 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 LGALS4P56470 323 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 PIGPP57054 158 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 HLA-DRB5Q30154 266 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 HCP5Q6MZN7 132 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 BEND2Q8NDZ0 799 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 OR11H6Q8NGC7 330 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 FAM216AQ8WUB2 273 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-203ENST00000377344 GPHA2Q96T91 129 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 SLC2A9Q9NRM0 540 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 SDHAF2Q9NX18 166 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF469Q96JG9 3925 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-203ENST00000377344 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 IL3RAP26951 378 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 UBE2E1P51965 193 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 ZNF626Q68DY1 528 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 AKR1E2Q96JD6 320 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 S1PR3Q99500 378 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 MARVELD1Q9BSK0 173 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 GHITMQ9H3K2 345 aa10.54□□□□□ -0.72
CBWD3-203ENST00000377344 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-203ENST00000377344 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-203ENST00000377344 CENPVL3A0A0U1RRI6 287 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 BUB1B-PAK6H3BSN5 160 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 M0R1X1 148 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 PEX14O75381 377 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 AVPP01185 164 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 VAMP1P23763 118 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 REG1BP48304 166 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 C4orf46Q504U0 113 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 GPR157Q5UAW9 335 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 ODF3L1Q8IXM7 274 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-203ENST00000377344 BVESQ8NE79 360 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 CAPSLQ8WWF8 208 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 RTN4IP1Q8WWV3 396 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-203ENST00000377344 C18orf12Q96KH6 178 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 MYO9AB2RTY4 2548 aa10.53□□□□□ -0.72
CBWD3-203ENST00000377344 SVEP1Q4LDE5 3571 aa10.52□□□□□ -0.72
CBWD3-203ENST00000377344 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms