RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PFN1P07737 140 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 S100GP29377 79 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 FOLR3P41439 243 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 SRYQ05066 204 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 P2RY6Q15077 328 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 TESK1Q15569 626 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 OR8G2PQ6IF36 304 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 TMEM183AQ8IXX5 376 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 RPP25LQ8N5L8 163 aaKnown RBP11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 LHX4Q969G2 390 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 ELOVL1Q9BW60 279 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 DDA1Q9BW61 102 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 PRSS50Q9UI38 385 aa11.96□□□□□ -0.49
CLCNKA-202ENST00000375692 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 SELLP14151 372 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 SSTP61278 116 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 TMEM41BQ5BJD5 291 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 NCR3LG1Q68D85 454 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 MISP3Q96FF7 219 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 POM121Q96HA1 1249 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 HIST1H2AAQ96QV6 131 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 P2RX4Q99571 388 aa11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 WDR61Q9GZS3 305 aaKnown RBP11.96□□□□□ -0.5
CLCNKA-202ENST00000375692 MRPL33O75394 65 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SAXO1Q8IYX7 474 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SGCZQ96LD1 299 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 PSMG3Q9BT73 122 aaPredicted RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SRD5A3Q9H8P0 318 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SLC39A9Q9NUM3 307 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SLC31A2O15432 143 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 TGOLN2O43493 480 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 RHBDL1O75783 438 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 SLC25A6P12236 298 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 GDF1P27539 372 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 APLNRP35414 380 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 RPS16P62249 146 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 Q0VFX4 171 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 PRSS8Q16651 343 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 TMEM164Q5U3C3 297 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 PPP1R32Q7Z5V6 425 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 ZNF664Q8N3J9 261 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 DLL3Q9NYJ7 618 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 KCNS2Q9ULS6 477 aa11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
CLCNKA-202ENST00000375692 AKAP13Q12802 2813 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 CYTIPO60759 359 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 HBG1P69891 147 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 HBG2P69892 147 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 SERF2P84101 59 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 OR5R1Q8NH85 324 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 TAF15Q92804 592 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 ZPBPQ9BS86 351 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 IL17BQ9UHF5 180 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 PCSK5Q92824 1860 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 ZNF705GA8MUZ8 300 aaPredicted RBP11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 WDR1O75083 606 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 SLC25A22Q9H936 323 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
CLCNKA-202ENST00000375692 CYC1P08574 325 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 GALR1P47211 349 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 SLC38A11Q08AI6 406 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 PLA2G3Q9NZ20 509 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 DVL1O14640 695 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 IFNA1P01562 189 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 IFNA10P01566 189 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 FAM58AQ8N1B3 248 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
CLCNKA-202ENST00000375692 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 A0A1W2PPQ1 181 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 A8MWP6 167 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 H7BYZ3 331 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 TM4SF5O14894 197 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 KBTBD11O94819 623 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 DEFA4P12838 97 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 TAS2R60P59551 318 aa11.92□□□□□ -0.5
CLCNKA-202ENST00000375692 TUSC5Q8IXB3 177 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms