RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 KCNMB1Q16558 191 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 SPINK14Q6IE38 97 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 SSX7Q7RTT5 188 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 GTF3C1Q12789 2109 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 CDIPTO14735 213 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 RHBDL1O75783 438 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 CPEB3Q8NE35 698 aaKnown RBP11.73□□□□□ -0.53
MCF2L-204ENST00000375608 NDUFAF3Q9BU61 184 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 TMEM9BQ9NQ34 198 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 LIN7CQ9NUP9 197 aaKnown RBP11.73□□□□□ -0.53
MCF2L-204ENST00000375608 NBASA2RRP1 2371 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 IGHV5-10-1A0A0J9YXX1 117 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 F6UZH7 168 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 H0Y980 276 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 FGF5P12034 268 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
MCF2L-204ENST00000375608 TMEM256Q8N2U0 113 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 FGFRL1Q8N441 504 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 SSMEM1Q8WWF3 244 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
MCF2L-204ENST00000375608 HRASP01112 189 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-204ENST00000375608 NUBP1P53384 320 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 GNB2P62879 340 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 FOXO1Q12778 655 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 HERPUD1Q15011 391 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-204ENST00000375608 KMT5CQ86Y97 462 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 RPP25LQ8N5L8 163 aaKnown RBP11.72□□□□□ -0.53
MCF2L-204ENST00000375608 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 REV3LO60673 3130 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 FOXI3A8MTJ6 420 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-204ENST00000375608 C20orf204Q6ZNR8 217 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 SIGLEC12Q96PQ1 595 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 NTF4P34130 210 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 FGF12P61328 243 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 OR8B8Q15620 311 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 EXT1Q16394 746 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 NMSQ5H8A3 153 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 CMTM2Q8TAZ6 248 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 TMEM54Q969K7 222 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
MCF2L-204ENST00000375608 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 ZG16O60844 167 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 TFF1P04155 84 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 MGST1P10620 155 aaKnown RBP11.71□□□□□ -0.53
MCF2L-204ENST00000375608 CYB561P49447 251 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 TFF3Q07654 80 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 TRIM61Q5EBN2 209 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 CRIP3Q6Q6R5 217 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 AGBL5Q8NDL9 886 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 FZR1Q9UM11 496 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 PCNX1Q96RV3 2341 aa11.71□□□□□ -0.53
MCF2L-204ENST00000375608 KBTBD11O94819 623 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 GZMHP20718 246 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 CTSSP25774 331 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 PAX9P55771 341 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 LINC00205P59089 165 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 APH1AQ96BI3 265 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 NOL4LQ96MY1 436 aaPredicted RBP11.71□□□□□ -0.54
MCF2L-204ENST00000375608 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.54
MCF2L-204ENST00000375608 EML6Q6ZMW3 1958 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 TFPI2P48307 235 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 SPCS3P61009 180 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 CATR1Q13166 79 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 ZNF726P1Q15940 193 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 VAMP8Q9BV40 100 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 CRIM1Q9NZV1 1036 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 NAGKQ9UJ70 344 aa11.71□□□□□ -0.54
MCF2L-204ENST00000375608 FCN1O00602 326 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 CBLN1P23435 193 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 CXCL12P48061 93 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 GNG3P63215 75 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 SERF2P84101 59 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-204ENST00000375608 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-204ENST00000375608 CDH20Q9HBT6 801 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 DLL3Q9NYJ7 618 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 IGKV1-6A0A0C4DH72 117 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 AQP7O14520 342 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 NAPSAO96009 420 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 C1QTNF9P0C862 333 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 CEACAM1P13688 526 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 PRAMEF5Q5TYX0 476 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 PRAMEF6Q5VXH4 476 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-204ENST00000375608 DTD1Q8TEA8 209 aa11.7□□□□□ -0.54
MCF2L-204ENST00000375608 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms