RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 EGLN1Q9GZT9 426 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 OR51B2Q9Y5P1 312 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PMS2P1A4D2B8 440 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 C5orf63A6NC05 138 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 SYNGR3O43761 229 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 NDUFB4O95168 129 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 REG1BP48304 166 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TFF3Q07654 80 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ATP6V1FQ16864 119 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 KIAA1456Q9P272 454 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PITPNC1Q9UKF7 332 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 LOC102723971A0A1B0GUV8 181 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TFF1P04155 84 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CCKARP32238 428 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 LYZP61626 148 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 RPS23P62266 143 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PCOLCEQ15113 449 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 OR4C5Q8NGB2 326 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 NAGKQ9UJ70 344 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ZDHHC8Q9ULC8 765 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CHCHD2Q9Y6H1 151 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CACNA1DQ01668 2161 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 LINC01387J3KSC0 135 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 MT-CO3P00414 261 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CELA3AP09093 270 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ARL14EPLP0DKL9 152 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 RPL11P62913 178 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 HLA-DRB5Q30154 266 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 RND1Q92730 232 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF581Q9P0T4 197 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CNOT1A5YKK6 2376 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PQLC2LA1A4F0 135 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 S1PR2O95136 353 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 HSPB1P04792 205 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 IFI6P09912 130 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 PRF1P14222 555 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 HOXA6P31267 233 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TGIF2LXQ8IUE1 241 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 C1orf210Q8IVY1 113 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 UBALD2Q8IYN6 164 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 OR5A2Q8NGI9 324 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 FGF11Q92914 225 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 FLYWCH2Q96CP2 140 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 BARX1Q9HBU1 254 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 AUP1Q9Y679 476 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CTXND1A0A1B0GTU2 59 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 M0R143 59 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 APCSP02743 223 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 F2RP25116 425 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 GLIPR1P48060 266 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 TNFAIP6P98066 277 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 SPEM2Q0P670 501 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ATP1A1-AS1Q5TC04 95 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CYB5R2Q6BCY4 276 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 LILRB1Q8NHL6 650 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 SMIM8Q96KF7 97 aa5.62□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF552Q9H707 407 aaPredicted RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 METTL1Q9UBP6 276 aaKnown RBP5.62□□□□□ -1.51
SMC1A-202ENST00000375340 CXorf1O96002 111 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 CRISP2P16562 243 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 KLF3P57682 345 aaPredicted RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 UBE2L3P68036 154 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 OR10S1Q8NGN2 331 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 TBX15Q96SF7 602 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 QTRT1Q9BXR0 403 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 OPN3Q9H1Y3 402 aaPredicted RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 GRIFINA4D1Z8 144 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 J3QT63 122 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 RRP8O43159 456 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 ZG16O60844 167 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 SRP14P37108 136 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 Q8WTZ3 238 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 MARS2Q96GW9 593 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 ZNF319Q9P2F9 582 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 A0A1W2PQM1 296 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 DBX1A6NMT0 343 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 C5orf24Q7Z6I8 188 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 VPS25Q9BRG1 176 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 GPR61Q9BZJ8 451 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 AKIRIN1Q9H9L7 192 aaPredicted RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 WISP1O95388 367 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 FXYD3Q14802 87 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 MIC13Q5XKP0 118 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 CCL17Q92583 94 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 TMPRSS2O15393 492 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 CSN3P07498 182 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 SARAFQ96BY9 339 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 FAM157CP0CG43 387 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 TIMP4Q99727 224 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 HES4Q9HCC6 221 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 IGKV1-9A0A0C4DH69 117 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 RHBDL1O75783 438 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 RAB7AP51149 207 aa5.61□□□□□ -1.51
SMC1A-202ENST00000375340 CPEB3Q8NE35 698 aaKnown RBP5.61□□□□□ -1.51
SMC1A-202ENST00000375340 LOC102724200A0A096LPH7 203 aaPredicted RBP5.6□□□□□ -1.51
SMC1A-202ENST00000375340 OR4C12Q96R67 309 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms