RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ZNF703Q9H7S9 590 aaPredicted RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 EXOSC4Q9NPD3 245 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 KCNIP1Q9NZI2 227 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 SOX21Q9Y651 276 aaPredicted RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 SNRNP200O75643 2136 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 GCM2O75603 506 aaPredicted RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 HRASP01112 189 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 KRASP01116 189 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 IGHG3P01860 377 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 PIRTP0C851 137 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 SRP14P37108 136 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 SSR4P51571 173 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 ZNF750Q32MQ0 723 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 UFSP1Q6NVU6 142 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 PAQR6Q6TCH4 344 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 FAM231DQ6ZW35 169 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 OR5AR1Q8NGP9 310 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 SLC37A2Q8TED4 501 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 DDB2Q92466 427 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 KLK6Q92876 244 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 PNPLA2Q96AD5 504 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 AK3Q9UIJ7 227 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 PCTPQ9UKL6 214 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 TP53TG1Q9Y2A0 90 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 PTPRSQ13332 1948 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 BPTFQ12830 3046 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 NSG1A0A0A6YYJ2 146 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 TRBV5-4A0A0C4DH59 114 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 IGLC7A0M8Q6 106 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 UPK1AO00322 258 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 TBL1XO60907 577 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 UBL3O95164 117 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 FAM157CP0CG43 387 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 CXCL12P48061 93 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 ZNF92Q03936 586 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 GGTLC2Q14390 218 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 LAIR2Q6ISS4 152 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 UNQ6126/PRO20091Q6UXV3 157 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 Q6ZTK2 550 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 PIANPQ8IYJ0 282 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
USP48-203ENST00000374732 TET1Q8NFU7 2136 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 ZNF587Q96SQ5 575 aaPredicted RBP6.7□□□□□ -1.34
USP48-203ENST00000374732 GGTLC1Q9BX51 225 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 FBXL15Q9H469 300 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 IL36AQ9UHA7 158 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
USP48-203ENST00000374732 INSL5Q9Y5Q6 135 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 DENND4CQ5VZ89 1909 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 CD38P28907 300 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 OR1E2P47887 323 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 GPM6AP51674 278 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 CFHR1Q03591 330 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 LIAT1Q6ZQX7 453 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 RPS27LQ71UM5 84 aaKnown RBP6.7□□□□□ -1.34
USP48-203ENST00000374732 ZNF555Q8NEP9 628 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 OR51A2Q8NGJ7 313 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 ZNF675Q8TD23 568 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 CARD19Q96LW7 228 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 PRADC1Q9BSG0 188 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 ELL3Q9HB65 397 aaPredicted RBP6.7□□□□□ -1.34
USP48-203ENST00000374732 BTRCQ9Y297 605 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 FIS1Q9Y3D6 152 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 SCN8AQ9UQD0 1980 aa6.7□□□□□ -1.34
USP48-203ENST00000374732 OR4C45A6NMZ5 311 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 SPRY3O43610 288 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 LEPP41159 167 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 FAM174BQ3ZCQ3 159 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 C1orf189Q5VU69 101 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 SLC25A26Q70HW3 274 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 OOSP2Q86WS3 158 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 OR2K2Q8NGT1 345 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 MUCL1Q96DR8 90 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 ZNF681Q96N22 645 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 AIG1Q9NVV5 245 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 NTNG1Q9Y2I2 539 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 M0R129 80 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 CCL24O00175 119 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 HYPMO75409 117 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 KBTBD11O94819 623 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 CSN3P07498 182 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 H3F3AP84243 136 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 HBMQ6B0K9 141 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 C3orf56Q8N813 242 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 DDIT4LQ96D03 193 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 PGLYRP3Q96LB9 341 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 GABRG3Q99928 467 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 TECRQ9NZ01 308 aaKnown RBP6.69□□□□□ -1.34
USP48-203ENST00000374732 C1RLQ9NZP8 487 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 RARRES3Q9UL19 164 aa6.69□□□□□ -1.34
USP48-203ENST00000374732 CEACAM18A8MTB9 384 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 XKRYO14609 159 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 ARPC2O15144 300 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 C1orf105O95561 183 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 MT-ATP8P03928 68 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 HTR1DP28221 377 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms