RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ASCL1P50553 236 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 ZCCHC24Q8N2G6 241 aaKnown RBP16.28■□□□□ 0.2
HDAC1-201ENST00000373548 DEFB108BQ8NET1 73 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 DIRC2Q96SL1 478 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 AGMATQ9BSE5 352 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 NGBQ9NPG2 151 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 PSG11Q9UQ72 335 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 ZNF705EA8MWA4 302 aaPredicted RBP16.28■□□□□ 0.2
HDAC1-201ENST00000373548 CHST1O43916 411 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 BTNL3Q6UXE8 466 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 ODF3L1Q8IXM7 274 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 TMEM252Q8N6L7 170 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 KDF1Q8NAX2 398 aaPredicted RBP16.28■□□□□ 0.2
HDAC1-201ENST00000373548 ST6GALNAC3Q8NDV1 305 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 C14orf79Q96F83 325 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 GAFA1Q96PS6 74 aa16.28■□□□□ 0.2
HDAC1-201ENST00000373548 BORCS7-ASMTA0A0B4J1R7 106 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 SHISA9B4DS77 424 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 WRBO00258 174 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 RAMP3O60896 148 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 PAX9P55771 341 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 MST1LQ2TV78 715 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 NCMAPQ5T1S8 102 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 DMRTC2Q8IXT2 367 aaPredicted RBP16.27■□□□□ 0.2
HDAC1-201ENST00000373548 NCOR1P1Q9H4R4 102 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 JPT1Q9UK76 154 aa16.27■□□□□ 0.2
HDAC1-201ENST00000373548 C1QTNF9P0C862 333 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 CGB3P0DN86 165 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 CGB7P0DN87 165 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 IRF2P14316 349 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 TNFRSF1AP19438 455 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 SULT1A2P50226 295 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 BRWD1-AS2P59051 145 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 MORN2Q502X0 79 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 OR2B11Q5JQS5 317 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF295-AS1Q8N0V1 137 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 MARC2Q969Z3 335 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 OR6C3Q9NZP0 311 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 GNG12Q9UBI6 72 aa16.27■□□□□ 0.19
HDAC1-201ENST00000373548 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 F2RL2O00254 374 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 GYPAP02724 150 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 LOXL3P58215 753 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 TLE1Q04724 770 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 CATR1Q13166 79 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 TEX36Q5VZQ5 186 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF788Q6ZQV5 615 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 FGFRL1Q8N441 504 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 SMIM8Q96KF7 97 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 CCL13Q99616 98 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 GINS3Q9BRX5 216 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 SLC25A31Q9H0C2 315 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 CALYQ9NYX4 217 aa16.26■□□□□ 0.19
HDAC1-201ENST00000373548 C17orf98A8MV24 154 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 MUC1P15941 1255 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-201ENST00000373548 Q3ZCU0 254 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 TCTEX1D2Q8WW35 142 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 NEUROG1Q92886 237 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 SAT2Q96F10 170 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-201ENST00000373548 PLPPR2Q96GM1 343 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF665Q9H7R5 613 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 NBEAQ8NFP9 2946 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 E7EQL1 145 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 CCL21O00585 134 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 YPEL1O60688 119 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 CLDN1O95832 211 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 OMGP23515 440 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 TUSC1Q2TAM9 212 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 FAM216BQ8N7L0 139 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 YPEL2Q96QA6 119 aa16.25■□□□□ 0.19
HDAC1-201ENST00000373548 FAM90A27PA6NNH2 459 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 LINC00473A8K010 186 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 B8ZZF3 427 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 MED6O75586 246 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF816Q0VGE8 651 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-201ENST00000373548 C17orf58Q2M2W7 97 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF66Q6ZN08 573 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 SPAG16Q8N0X2 631 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 MMP24Q9Y5R2 645 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 CACNA1AO00555 2505 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 ATRXP46100 2492 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 RAB19A4D1S5 217 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 VSTM5A8MXK1 200 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 SCO1O75880 301 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 LINC00205P59089 165 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 CLINT1Q14677 625 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 FBXL19-AS1Q494R0 122 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 FAM209AQ5JX71 171 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 PXDC1Q5TGL8 231 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 HSD17B10Q99714 261 aaKnown RBP16.24■□□□□ 0.19
HDAC1-201ENST00000373548 FAM234AQ9H0X4 552 aa16.24■□□□□ 0.19
HDAC1-201ENST00000373548 PKDREJQ9NTG1 2253 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 ADGRG4Q8IZF6 3080 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 PROP1O75360 226 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 CST7O76096 145 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 S1PR2O95136 353 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 SEC11BP0C7V7 166 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 P0C879 139 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms