RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 DRAM1Q8N682 238 aa13.85□□□□□ -0.19
SDC4-201ENST00000372733 LINC00470Q9BZP3 86 aa13.85□□□□□ -0.19
SDC4-201ENST00000372733 DIDO1Q9BTC0 2240 aaKnown RBP13.85□□□□□ -0.19
SDC4-201ENST00000372733 LRP5LA4QPB2 252 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 PPP5D1E7EU14 171 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 CFIP05156 583 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
SDC4-201ENST00000372733 WNT5AP41221 380 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 SPINK14Q6IE38 97 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 Q6P435 159 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 OR5B12Q96R08 314 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 MKRN2OSH3BPM6 223 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 DEFA4P12838 97 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 APLNRP35414 380 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 ZNF664Q8N3J9 261 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 OR4F5Q8NH21 305 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
SDC4-201ENST00000372733 MISP3Q96FF7 219 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 OR4F4Q96R69 305 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 PARD6GQ9BYG4 376 aaPredicted RBP13.84□□□□□ -0.19
SDC4-201ENST00000372733 TRAPPC2LQ9UL33 140 aa13.84□□□□□ -0.19
SDC4-201ENST00000372733 ARHGAP21Q5T5U3 1957 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 IGHV3-64DA0A0J9YX35 117 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 OR5B21A6NL26 309 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 COX5BP10606 129 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 SELLP14151 372 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 CYB561P49447 251 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 PSMB3P49720 205 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 PRSS8Q16651 343 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 TMEM14EPQ6UXP3 125 aa13.83□□□□□ -0.19
SDC4-201ENST00000372733 ZNF705GA8MUZ8 300 aaPredicted RBP13.83□□□□□ -0.2
SDC4-201ENST00000372733 IDH3GP51553 393 aaPredicted RBP13.83□□□□□ -0.2
SDC4-201ENST00000372733 TNFRSF9Q07011 255 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 MED12LQ86YW9 2145 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 FGFRL1Q8N441 504 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 RAB24Q969Q5 203 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 DOCK7Q96N67 2140 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 STRADBQ9C0K7 418 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 PLA2G3Q9NZ20 509 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 CLN8Q9UBY8 286 aa13.83□□□□□ -0.2
SDC4-201ENST00000372733 RAMP3O60896 148 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 HRASP01112 189 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 LHX2P50458 406 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TAS2R60P59551 318 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TGIF2LYQ8IUE0 185 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TMEM37Q8WXS4 190 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 OR51I2Q9H344 312 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 FUT9Q9Y231 359 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 PCSK5Q92824 1860 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 FRYQ5TBA9 3013 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 A8MWP6 167 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
SDC4-201ENST00000372733 OR2H2O95918 312 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 CEACAM6P40199 344 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 PMP22Q01453 160 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TFF3Q07654 80 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 COA6Q5JTJ3 125 aaKnown RBP13.82□□□□□ -0.2
SDC4-201ENST00000372733 ZNF497Q6ZNH5 498 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 OR5T1Q8NG75 326 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 HES7Q9BYE0 225 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 TIMM9Q9Y5J7 89 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 MPC1Q9Y5U8 109 aa13.82□□□□□ -0.2
SDC4-201ENST00000372733 CTXND1A0A1B0GTU2 59 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 J3QT63 122 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 NTN3O00634 580 aaPredicted RBP13.81□□□□□ -0.2
SDC4-201ENST00000372733 PMS2P11Q13670 270 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 FAM53AQ6NSI3 398 aaPredicted RBP13.81□□□□□ -0.2
SDC4-201ENST00000372733 MOB1BQ7L9L4 216 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 IFNL4K9M1U5 179 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 IL18BPO95998 194 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 KRASP01116 189 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 GYPAP02724 150 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 G6PCP35575 357 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 NUBP1P53384 320 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 CLDN18P56856 261 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 PLP2Q04941 152 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 FFAR4Q5NUL3 377 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 WDR86Q86TI4 376 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 VASH2Q86V25 355 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 PKIBQ9C010 78 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
SDC4-201ENST00000372733 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
SDC4-201ENST00000372733 FAM166BA8MTA8 275 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 ZNF816Q0VGE8 651 aaPredicted RBP13.8□□□□□ -0.2
SDC4-201ENST00000372733 C3AR1Q16581 482 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 CENPVQ7Z7K6 275 aaPredicted RBP13.8□□□□□ -0.2
SDC4-201ENST00000372733 APH1AQ96BI3 265 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 WFIKKN1Q96NZ8 548 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 BOKQ9UMX3 212 aaPredicted RBP13.8□□□□□ -0.2
SDC4-201ENST00000372733 MRPS18CQ9Y3D5 142 aaKnown RBP13.8□□□□□ -0.2
SDC4-201ENST00000372733 FAM186AA6NE01 2351 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 PAGE4O60829 102 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 MT-CO3P00414 261 aa13.8□□□□□ -0.2
SDC4-201ENST00000372733 BMP5P22003 454 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms