RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 CLDN14O95500 239 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 SP9P0CG40 484 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 MEF2BQ02080 365 aaPredicted RBP9.9□□□□□ -0.83
PTPRF-203ENST00000372407 RIPPLY2Q5TAB7 128 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 LINC01590Q5TEZ4 76 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 DGAT2L7PQ6IED9 249 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 DHRS11Q6UWP2 260 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF383Q8NA42 475 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 OR8B3Q8NGG8 313 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 OR2D3Q8NGH3 330 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 AQP10Q96PS8 301 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 OR8B2Q96RD0 313 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 TMEM204Q9BSN7 226 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 HSF4Q9ULV5 492 aa9.9□□□□□ -0.83
PTPRF-203ENST00000372407 SEMA7AO75326 666 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 HSPB1P04792 205 aaKnown RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 NAT1P18440 290 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 PKIAP61925 76 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 ASCL5Q7RTU5 278 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 AQP3Q92482 292 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 RSG1Q9BU20 258 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 C16orf97H3BN30 126 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 GFRA3O60609 400 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 ORM1P02763 201 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 PPOXP50336 477 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 MFAP2P55001 183 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 WDFY1Q8IWB7 410 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 TMEM208Q9BTX3 173 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 TTTY12Q9BZ98 90 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 CREBBPQ92793 2442 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 CYB5R3P00387 301 aaPredicted RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 ACAA1P09110 424 aaPredicted RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 SCTP09683 121 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 H2BFSP57053 126 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 CXorf66Q5JRM2 361 aaPredicted RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 NUDT16L1Q9BRJ7 211 aaKnown RBP9.89□□□□□ -0.83
PTPRF-203ENST00000372407 LHFPL6Q9Y693 200 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 DHRS7CA6NNS2 312 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 DOLPP1Q86YN1 238 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 TPRX1Q8N7U7 411 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 ASCL3Q9NQ33 180 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 PAM16Q9Y3D7 125 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 ACACAQ13085 2346 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 RLFQ13129 1914 aa9.89□□□□□ -0.83
PTPRF-203ENST00000372407 THSD7BQ9C0I4 1608 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 MIA3Q5JRA6 1907 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 CD82P27701 267 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 TLNRD1Q9H1K6 362 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 NPTNQ9Y639 398 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 C4orf51C9J302 202 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 HBZP02008 142 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 CD40P25942 277 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 P2RY6Q15077 328 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 C1QTNF12Q5T7M4 302 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF788Q6ZQV5 615 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 FAM222BQ8WU58 562 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 ADIPOR1Q96A54 375 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 OR2A4O95047 310 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 MT-ND6P03923 174 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 MPV17P39210 176 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 FAM214BQ7L5A3 538 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 OR2A7Q96R45 310 aa9.88□□□□□ -0.83
PTPRF-203ENST00000372407 F2RL2O00254 374 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 CIDEAO60543 219 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 LMX1BO60663 402 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 RPL7P18124 248 aaKnown RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 UCP2P55851 309 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 FHL5Q5TD97 284 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 C16orf82Q7Z2V1 217 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 LILRB1Q8NHL6 650 aaPredicted RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 POM121Q96HA1 1249 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 ZNF552Q9H707 407 aaPredicted RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 NBASA2RRP1 2371 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 MGAMO43451 1857 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 TDRD6O60522 2096 aaKnown RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PPIAL4EA0A075B759 164 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 A8MWL6 223 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PPIAL4DF5H284 164 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 ADAM11O75078 769 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 APCSP02743 223 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PPIAL4FP0DN26 164 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 SELENOTP62341 195 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 COL10A1Q03692 680 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 MMDQ15546 238 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 EIF4E3Q8N5X7 224 aaKnown RBP9.87□□□□□ -0.83
PTPRF-203ENST00000372407 FAM181AQ8N9Y4 354 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 VN1R17PQ8TDU5 208 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 FAM206AQ9NX38 181 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 PPIAL4AQ9Y536 164 aa9.87□□□□□ -0.83
PTPRF-203ENST00000372407 WNK2Q9Y3S1 2297 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms